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SCNpilot_expt_1000_bf_scaffold_2833_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5062..6693)

Top 3 Functional Annotations

Value Algorithm Source
ribulokinase n=1 Tax=Rhizobium giardinii RepID=UPI00036EDF81 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 543.0
  • Bit_score: 952
  • Evalue 1.60e-274
  • rbh
Ribulokinase 2 {ECO:0000313|EMBL:EYR78692.1}; EC=2.7.1.16 {ECO:0000313|EMBL:EYR78692.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 543.0
  • Bit_score: 948
  • Evalue 4.10e-273
FGGY family carbohydrate kinase protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 533.0
  • Bit_score: 823
  • Evalue 4.50e-236
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGAACACCTCATCCTCCGCACGCCCCGCGGGCGGCGAACGCTACCTCGTCGGCGTCGATGTCGGCACGGGCAGCGCCAGGGCCGGCGTCTTCGACCTTTCCGGCCGCATGCTGGCCTCCGGCAAGCGCGACATCTCGCTCTTCCGCGAGGCGGGCGCGATGGTGGAGCAGTCGAGCACGGAGATCTGGGCCGCCGTCTGCGCCGCGGTCCGCGAGGCCGTCGCGAAGGCGGGGGTCGCACCGGAGAAGGTCGCCGGCATCGGCTTCGACGCAACCTGCTCGTTGGTCGTCCTCGGCAAGGATGGCGCGCCGCTGCCCGTCGGCCCCTCGGAAGACCCCGAGCGCGACATCATCGTCTGGATGGACCATCGCGCGGTCGACCAGGTCGAGCGCATCAATGCGACGGGGCACCCGGTGCTGCGCTATGTCGGCGGGCGCATCTCGCCGGAGATGGAGACCCCGAAGCTGCTGTGGCTGAAGGAAAACCGCCCGCAGGTGTTCGACGCGGCCTGGCAGTTCTTCGACCTTGCGGATTTCCTCACCTGGCGCGCGACGGGCGATCTTGCCCGCTCCACCTGCACGGTCACCTGCAAGTGGACGTATCTGGCGCATGAGAAGCGCTGGGATCCGGGCTATTTCCACGCCATCGGCCTCGGCGTGCTTGCCGACGAAGGTTTCGCCCGTATCGGCCAGAGCGTTGTCGAGCCCGGCACGCCGGTCGGCGCGGGGCTGACCGCGCGCGCGGCGGCGGACCTCGGCCTTGCCGCCGGCACGCCTGTCGGCGCGGGCATGATCGACGCCCATGCGGGCGGCATCGGCACGGTGGGCGTCGACGGCCCGCCGGAAAACAGCCTCGGCTATGTCTTCGGCACGTCCTCCTGCACCATGACCTCGACCCACGAGCCGGTCTTCGTGCCGGGCGTCTGGGGGCCGTATTTCTCGGCCATGGTGCCGGGCATGTGGCTCAACGAGGGCGGCCAGTCGGCCGCGGGCGCGGCCATCGAGCAGCTTCTCTCCTTCCACCCGGCGGCCGGCGAAGCGGCCGAGCGCGCCAGATCGCGCGGCCTCTCCCTGCCGGTCCTGCTGGCGGAACTTGCGGCCGAAAAGGCCGAAACGCTTTCCGGCGTCGCGGGGCTGGCGGACGGGCTGCATGTCGTGCCGGAATTCCTCGGCAACCGCGCGCCCTTCGCCGATCCGCACGCCCGCGCCGCCATCGTCGGCCTCGGCATGGAGCGCGACATCGACAATCTCGTCGCGCTCTACGTCGCCGGCCTCTGCGGCATCGGCTACGGGCTGAAGCAGATCATCGACGCGCAGGCCGCGGCCGGGGCGCCGGTCGAAAAGATCGTCATCAGCGGCGGTGCCGGGCAGCTCGATCTCGTGCGCCAGCTCCTCGCCGACGCGACGGGAAAGCCCCTGCTGGCGACCCGCTCGGAAGAACCCGTCCTGCTGGGCGCGGCCATTCTCGGCAGCGTCGCCGGCAAGGCGTTTGCCGACGTGCGCCCGGCCATGGCCGCGCTTTCGGCGACCGACCGCACCTACCTGCCGGCCGGCGGCGAGACCGCCGCCCTCCACGCCGCCCGCTACGACGCCTTCAAGCAGCTCCAGGACCTCGCGCGGAAGATCCGCTAA
PROTEIN sequence
Length: 544
MNTSSSARPAGGERYLVGVDVGTGSARAGVFDLSGRMLASGKRDISLFREAGAMVEQSSTEIWAAVCAAVREAVAKAGVAPEKVAGIGFDATCSLVVLGKDGAPLPVGPSEDPERDIIVWMDHRAVDQVERINATGHPVLRYVGGRISPEMETPKLLWLKENRPQVFDAAWQFFDLADFLTWRATGDLARSTCTVTCKWTYLAHEKRWDPGYFHAIGLGVLADEGFARIGQSVVEPGTPVGAGLTARAAADLGLAAGTPVGAGMIDAHAGGIGTVGVDGPPENSLGYVFGTSSCTMTSTHEPVFVPGVWGPYFSAMVPGMWLNEGGQSAAGAAIEQLLSFHPAAGEAAERARSRGLSLPVLLAELAAEKAETLSGVAGLADGLHVVPEFLGNRAPFADPHARAAIVGLGMERDIDNLVALYVAGLCGIGYGLKQIIDAQAAAGAPVEKIVISGGAGQLDLVRQLLADATGKPLLATRSEEPVLLGAAILGSVAGKAFADVRPAMAALSATDRTYLPAGGETAALHAARYDAFKQLQDLARKIR*