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SCNpilot_expt_1000_bf_scaffold_2833_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6760..7488)

Top 3 Functional Annotations

Value Algorithm Source
Ribitol 2-dehydrogenase RbtD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 242.0
  • Bit_score: 458
  • Evalue 5.40e-126
  • rbh
Ribitol 2-dehydrogenase RbtD {ECO:0000313|EMBL:EYR78691.1}; EC=1.1.1.56 {ECO:0000313|EMBL:EYR78691.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 242.0
  • Bit_score: 458
  • Evalue 7.60e-126
ribitol 2-dehydrogenase (EC:1.1.1.56); K00039 ribitol 2-dehydrogenase [EC:1.1.1.56] similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 242.0
  • Bit_score: 420
  • Evalue 3.90e-115
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCTGACCTCATGAAGGGCAAGATCGCCGCCATCACGGGCGCCGCCTCCGGCATCGGCCTCGAATGCGCCCGCACCCTGATCGCCGAAGGCGCGAAGGTGGTGCTCGTCGACCGCGCGCAGCAAAGGCTGGAACAGCTCTGCGGCGAGCTCGGCCCGAATGCCCTGCCGCTCGTCGTCGACCTCCTGAAGCCCTCCGAGGTCTCCGGCATGCTGCCGCGCATCCTCGACATCGCCGGCGGGCTCGACGTCTTCCACGCCAATGCCGGCGCCTATATCGGCGGGCCGGTGGCCGAAGGCGACCCGGATGCCTGGGACCGCATGCTGAACCTCAACATCAACGCGGCCTTCCGCTCGGTCCATGCGGTGCTGCCCTACATGATCGAAAAGAAGACGGGCGACATTCTCTTCACCTCCTCGATCGCCGGCGTCGTGCCGGTCGTCTGGGAGCCGATCTACACGGCCTCGAAATTCGCCGTGCAGGCCTTCGTGCACTCGACCCGCCGGCAGGTGGCGCAGCACGGCGTGCGCGTCGGCGCGGTCCTGCCCGGCCCGGTCGTCACGGCGCTCCTCGACGACTGGCCGAAGGAGAAGATGGACGAGGCGCTCGCCAACGGCAGCCTGATGCAGCCGAAGGAAGTGGCCGACGCCGTGCTCTTCATGCTGACGCGCCCGCGCAACGTCACGATCCGCGACCTCGTGATCCTGCCGAACAGCGTCGATCTCTGA
PROTEIN sequence
Length: 243
MADLMKGKIAAITGAASGIGLECARTLIAEGAKVVLVDRAQQRLEQLCGELGPNALPLVVDLLKPSEVSGMLPRILDIAGGLDVFHANAGAYIGGPVAEGDPDAWDRMLNLNINAAFRSVHAVLPYMIEKKTGDILFTSSIAGVVPVVWEPIYTASKFAVQAFVHSTRRQVAQHGVRVGAVLPGPVVTALLDDWPKEKMDEALANGSLMQPKEVADAVLFMLTRPRNVTIRDLVILPNSVDL*