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SCNpilot_expt_1000_bf_scaffold_2833_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8763..9584)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribose/galactose/methyl galactoside import ATP-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6L8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 273.0
  • Bit_score: 491
  • Evalue 6.50e-136
  • rbh
Putative ribose/galactose/methyl galactoside import ATP-binding protein {ECO:0000313|EMBL:EYR78689.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR78689.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 273.0
  • Bit_score: 491
  • Evalue 9.10e-136
ABC-type sugar transport systems, ATPase component (EC:3.6.3.17) similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 270.0
  • Bit_score: 436
  • Evalue 4.60e-120
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGACAGCCACGCAAGAAAGTGCTCCCGCCAAGGGAGAGCCGGTGCTGCGCCTTCGCGGCGTATCCAAGAATTTCGGCGCCGTATCCGCATTGACCGACATCGAGCTCGACGTGCAGGCCGGCGAAGTCGTCGCGCTCGTCGGTGACAACGGTGCCGGCAAGTCGACGCTGGTCAAGGTGCTGGCCGGCGTGCATCAGCCCTCGTCGGGCACGATCGAGTTCTGCGGCCGCCAGGTGACGCTCGACAGTCCCGCCAAGGCGCTGGACCTCGGCATCGCCACCGTCTTCCAGGACCTCGCGCTCTGCGAGAACCTCGACGTGGTCGCCAATCTCTTCCTCGGCCATGAAATGTCGCCCTTCGCGCTCGACGAAGTGGCGATGGAGGTGCGCGCCTGGACGCTGCTGCGCGAGCTTGCCGCGCGCATCCCGTCCGTCCGCGAGCCCATCGCCTCGCTTTCCGGCGGCCAGCGGCAGACCGTCGCCATCGCCCGCTCGCTGCTGCTCAATCCCAAGCTCATCATGCTGGACGAGCCGACCGCCGCGCTCGGCGTCGCGCAGACGGCCGAGGTGCTGAACCTTATCGAGCGCGTGCGCGACCGCGGCCTCGGCGTCATCATCATCAGCCACAACATGGAGGACGTGCGCGCCGTCGCCGACCGCATCGTCGTGCTGCGCCTCGGCCGCAACAACGGCATCTTCACGCCCGACTCGTCCAGCCAGGAGCTCGTCTCCGCCATCACGGGCGCCACGGACAATTCCGTCTCGCGCCGTGCCGACCGCAAGTCCGGTCACGTCCAGGAAAACCACGGGGGCGCCGCATGA
PROTEIN sequence
Length: 274
MTATQESAPAKGEPVLRLRGVSKNFGAVSALTDIELDVQAGEVVALVGDNGAGKSTLVKVLAGVHQPSSGTIEFCGRQVTLDSPAKALDLGIATVFQDLALCENLDVVANLFLGHEMSPFALDEVAMEVRAWTLLRELAARIPSVREPIASLSGGQRQTVAIARSLLLNPKLIMLDEPTAALGVAQTAEVLNLIERVRDRGLGVIIISHNMEDVRAVADRIVVLRLGRNNGIFTPDSSSQELVSAITGATDNSVSRRADRKSGHVQENHGGAA*