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SCNpilot_expt_1000_bf_scaffold_7026_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 10736..11128

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EYR79698.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 130.0
  • Bit_score: 253
  • Evalue 1.50e-64
sdhC; Succinate dehydrogenase cytochrome b-556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 130.0
  • Bit_score: 225
  • Evalue 1.30e-56
Succinate dehydrogenase cytochrome b-556 subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A296_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 130.0
  • Bit_score: 225
  • Evalue 4.10e-56

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGAATGTCACTCGAAGCCGGCCGCTCTCGCCGCATCTCCAGGTCTACAAACCGATCCCGACGATGGTCATGTCCATCGTGCATCGCATCACCGGCATGGCGCTCTATTTCGGCACCGTCCTCGTCGCCTGGTGGCTGATCGCGGCGGCGACGGGCGAGGTCTATTTCGACTGGGTGAGCTGGTTCTTCGGCACCTGGATCGGCCGCCTCGTGCTCTTCGGCTATACCTGGGCGTTGATGCACCACATGCTCGGGGGCCTTCGCCACTTCATGTGGGATATGGGCCGCGGATACGAGAAGCATTTTTCCACCCGGCTCGCCCTTCTGACCCCGGTCGTCTCCGTCGCCCTGACGGTGCTGATCTGGATCGCCGGCACCCTGGCCCGCTGA
PROTEIN sequence
Length: 131
MANVTRSRPLSPHLQVYKPIPTMVMSIVHRITGMALYFGTVLVAWWLIAAATGEVYFDWVSWFFGTWIGRLVLFGYTWALMHHMLGGLRHFMWDMGRGYEKHFSTRLALLTPVVSVALTVLIWIAGTLAR*