ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7026_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 11139..11519

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase hydrophobic membrane anchor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVY5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 126.0
  • Bit_score: 244
  • Evalue 6.40e-62
Succinate dehydrogenase hydrophobic membrane anchor {ECO:0000313|EMBL:EYR79699.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 126.0
  • Bit_score: 244
  • Evalue 9.00e-62
sdhD; succinate dehydrogenase hydrophobic membrane anchor (EC:1.3.99.1); K00242 succinate dehydrogenase membrane anchor subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 4.20e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGACATGCGCACGCCCCTCGGCAAGGTTCGCGGCCTCGGCTCGGCAAAGGACGGCACGGAGCATTTCTGGCGCCAGCGCCTGACGGCCGTCGCCAACGTGCCGCTGATACTGTTCTTCGTCGGGTTCCTCATCTGCTACAACGGTGCGTCCTATGCGGAGGTGACGGCGGCGCTGTCGCATCCCATCGTCGCCGTCCTCATGGGCCTCGTCGTCGTTTCCGGCCTCATCCACATGAAGCTCGGCATGCAGGTCGTCATCGAGGACTATGTGCATGCGGAGGGCGTGAAGATCGGCCTTCTCATGCTCAACACCTTCTTCGCGATCCTGGTCGGCGGGCTCTGTCTTTTCGCCGTCCTCAAAATCGCCTTCGCAGGATAA
PROTEIN sequence
Length: 127
MDMRTPLGKVRGLGSAKDGTEHFWRQRLTAVANVPLILFFVGFLICYNGASYAEVTAALSHPIVAVLMGLVVVSGLIHMKLGMQVVIEDYVHAEGVKIGLLMLNTFFAILVGGLCLFAVLKIAFAG*