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SCNpilot_expt_1000_bf_scaffold_2774_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(9362..10465)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic binding ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHT0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 367.0
  • Bit_score: 718
  • Evalue 3.40e-204
  • rbh
ABC-type Fe3+ transport system periplasmic component {ECO:0000313|EMBL:EYR77701.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 367.0
  • Bit_score: 718
  • Evalue 4.70e-204
putative periplasmic binding ABC transporter similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 367.0
  • Bit_score: 686
  • Evalue 3.40e-195
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGTCACATACGAGACGCCTGCTTTCGCTCTCCACCGCCCTGGTGGTCGCGTCCACCTCGCTCGCCTTCGCCGAGCCGAGCGCGGAACTCATCGAAGCCGCAAAGAAGGAAGGCATGCTCACGACGGTCGCCCTTCCGCACGACTGGTGCGGCTACGGCGACGTCATCGCCGCCTTCAAGGCGAAATATCCGGAGATCCAGGTCAACGAGCTGAACCCCGACGCCGGCTCCGCCGACGAGATCGAGGCCATCAAGGCCAACAAGGACAACAAGGGCCCGCAGTCGCCCGACGTGATCGACGTCGGCCTCGCCTTCGGCCCCTCCGCCAAGGAAGAAGGCCTGCTGCAGCCCTACAAGGTTTCCACCTGGGACGAGATCCCGGACACCATCAAGGATGCCGAAGGCTACTGGTACGGCGACTATTACGGCGTGATGGCCTTCCTCGTGAACAAGGACCTCGTCGCCAATTCGCCGAAGGACTGGGCCGACCTCCTGAAGCCGGAATATTCCGGCCAGGTGGCGCTTGCCGGCGACCCGCGCGCTTCCAACCAGGCCATCCTTGGCGTTCTCGCCGCCGGCCTCGGCAAGGGCGCGAAGGCCGGCAAGGAAGCCGGCGAAGCTGGCCTTGCCTATTTCGCCGAGATGAACAAGGCCGGCAACTTCGTTCCGGTCATCGGCAAGTCCGGCACGCTCGCCCAGGGCTCGACCCCGATCGTCGTCGCCTGGGACTACAATGCGCTGAGCTGGGCCAAGACGCTCAACGGCAACCCGCCGACGGAAGTCATCGTTCCGGAATCGGGCGTTCTGGCCGGCGTCTACGTCCAGGGCATCTCGGCCTATGCGCCGCACCCGAACGCCGCCAAGCTGTGGATGGAGCATCTCTATTCCGACGAAGGTCAGCTCGGCTGGCTGAAGGGCTATTGCCATCCGGCGCGCTTCAACGCCATGGTCAAGGCCGGCAAGGTTCCGCAGGACCTGATCGACGCCCTGCCGCCGGCGGCTTCCTATGAGAAGGCCTACTTCCCGACGCTCGAGGAAGTGGACGCCAACAAGGCCGCCGTCACCGGCGCATGGGACAGCGTCGTCGGCGCGAACGTGCAGTAA
PROTEIN sequence
Length: 368
MSHTRRLLSLSTALVVASTSLAFAEPSAELIEAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEIQVNELNPDAGSADEIEAIKANKDNKGPQSPDVIDVGLAFGPSAKEEGLLQPYKVSTWDEIPDTIKDAEGYWYGDYYGVMAFLVNKDLVANSPKDWADLLKPEYSGQVALAGDPRASNQAILGVLAAGLGKGAKAGKEAGEAGLAYFAEMNKAGNFVPVIGKSGTLAQGSTPIVVAWDYNALSWAKTLNGNPPTEVIVPESGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDEGQLGWLKGYCHPARFNAMVKAGKVPQDLIDALPPAASYEKAYFPTLEEVDANKAAVTGAWDSVVGANVQ*