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SCNpilot_expt_1000_bf_scaffold_6326_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5660..5848)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTY2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 62.0
  • Bit_score: 117
  • Evalue 4.50e-24
UPF0434 protein SHLA_6c000540 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 62.0
  • Bit_score: 117
  • Evalue 6.30e-24
hypothetical protein; K09791 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 108
  • Evalue 8.60e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGGATGCCAGCACCAGCCGGGTCGACCCGAAACTGCTCGAACTCCTCGTCTGCCCGCTGACCAAGGGGCGGCTGACCTATGACGCGAAGGCCGGCGAACTCGTCTCCGAAAAGGCGAAGCTCGCCTACCCGATCCGCGACGGGATTCCGATCATGCTGATCTCGGAGGCGCGGGAGATCAAGGACTGA
PROTEIN sequence
Length: 63
MDASTSRVDPKLLELLVCPLTKGRLTYDAKAGELVSEKAKLAYPIRDGIPIMLISEAREIKD*