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SCNpilot_expt_1000_bf_scaffold_6326_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5857..6573)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent protease La domain-containing protein {ECO:0000313|EMBL:EYR79649.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 226.0
  • Bit_score: 403
  • Evalue 1.70e-109
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003687808 similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 240.0
  • Bit_score: 360
  • Evalue 1.50e-96
  • rbh
peptidase S16 lon domain-containing protein; K07157 similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 226.0
  • Bit_score: 358
  • Evalue 1.40e-96
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGTTGCGCCGCGCCGCGAAATGGGAAGGCAATGCCATGCAGGTGGGAAATGCGCGTTATCTGAAGCCGGCGGACCTGCCCGAGGCCATCCCCGTCTTTCCGCTGACGGGTGCATTGCTCCTGCCCGGCGGCCAGCTCCCGCTCAACATCTTCGAGCCGCGCTATCTCGCCATGTTCGACGACGCGCTCGCCTCGCACCGGCTGATCGGCATGGTGCAGCCCGTCTTCGGCGAGCACCGCGCGGAGGAGACGGCAGGCGACACGCCGTCGCTTTGCCAGGTCGGCTGCCTCGGCCGCATCACCTCCTTCGCCGAGACCGGCGACGGGCGTTACATCGTCTCGCTCACCGGCATCTGCCGCTACCGGCTGCTGGAGGAGGTGCGCGGCGGCAAGTCCTATCGCAGCTTTCGCATCGCGCCCTTCATCACGGACCTCTCGGCCAGCGACGACGAGCAGAGCGTCGACCGCGAGGCGCTGCTTGCCGCCTTCCGGGCCTATCTGGAGGCCAACAAGCTGGAAGCGGACTGGGAGAGTGTCGAGCGCGCCAGCAACATGACGCTCGTCAATTCCATGGCGATGATGTCGCCCTACGGGCCGGCGGAAAAGCAGGCGCTGCTGGAGGCGCCCGATCTCAAGACGCGGGCGGAAACGCTGATCGCGATCACCGAAATCGTGCTGGCGCGCAGTTACGGCGACGTCGACACGCGGCTGCAATAG
PROTEIN sequence
Length: 239
MLRRAAKWEGNAMQVGNARYLKPADLPEAIPVFPLTGALLLPGGQLPLNIFEPRYLAMFDDALASHRLIGMVQPVFGEHRAEETAGDTPSLCQVGCLGRITSFAETGDGRYIVSLTGICRYRLLEEVRGGKSYRSFRIAPFITDLSASDDEQSVDREALLAAFRAYLEANKLEADWESVERASNMTLVNSMAMMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARSYGDVDTRLQ*