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SCNpilot_expt_1000_bf_scaffold_4728_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 625..807

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYX4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 60.0
  • Bit_score: 116
  • Evalue 9.70e-24
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:EYR82518.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 60.0
  • Bit_score: 116
  • Evalue 1.40e-23
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 60.0
  • Bit_score: 108
  • Evalue 8.30e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCGATGAACGCCGTCGCCAAGCTGCTGCTGGAGAAGAAGGAAGTCACCGACGGCATGGACCTCGGCGTCGAAGGCTACAACAAGGTCTCCGTCAAGCAGGGCGCGGGCAAGGGTCTCCTGATCCTCGGCAACGGCATGGTCCTCGCCGACAAGGCGACCTACAAGGAACACATGTTCTGA
PROTEIN sequence
Length: 61
MAMNAVAKLLLEKKEVTDGMDLGVEGYNKVSVKQGAGKGLLILGNGMVLADKATYKEHMF*