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SCNpilot_expt_1000_bf_scaffold_8754_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5017..5781

Top 3 Functional Annotations

Value Algorithm Source
Glucose 1-dehydrogenase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU19_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 254.0
  • Bit_score: 418
  • Evalue 6.50e-114
  • rbh
Glucose 1-dehydrogenase 2 {ECO:0000313|EMBL:EYR80774.1}; EC=1.1.1.47 {ECO:0000313|EMBL:EYR80774.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 254.0
  • Bit_score: 418
  • Evalue 9.10e-114
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 254.0
  • Bit_score: 331
  • Evalue 2.50e-88
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGACACGCCTCGACACCAAGGTCGCCATCATCACCGGTGCAAGTTCCGGCATCGGCCGCGCCGCCGCGCTGCTCTTCGCCCGGCAGGGCGCCAGCGTCGTGCTTTCAGCACGCGGGCGCGACCGGCTGGAGGCGGTCGCCGAGGAGATCCGCGCGGCCGGCGGGACCGCCCTGGCCGTCCCGGGCGACGTCAGCGAGGAGGCGCATCATGCGGCGCTGGTCGATGCCGCGCAGGCGGAATTCGGCGGCCTCGACATCGCCTTCAACAATGCCGGCACCACCGGGCCGGTCGGCGCCCTCCCCGAGCTTTCCATGGCGGCGTGGCAAACCGTGCTCGACATCAACCTGACAAGCGGCTTCCTTGCCGCGAAGTACCAACTCCCCGCCATGGAGGCGCGCGGCGGCGGCAGCATCGTCTTCACATCGACCTTCGTCGGCTACACGGCCGGCTTTCCGGGGCTTGCCGCCTATGCGGCGTCGAAATCCGGCCTCGTCGGGCTCGTGCAGGTGCTGGCCTGCGAATACGGCCCGAAGGGCATTCGCGTGAATGCGCTGCTGCCCGGCGCGACGGATACGCCGATGGGCCGTCACGTCGCAAATACGCCGGAGGTCTTGCAGTTCGTCGCGGGCCTCAACGCCTTCAAGCGCATCGCCGAGCCCGAGGAGATCGCACAGGCCGCGCTGTTCCTCTGCTCGCCGGCCTCCAGCTTCACGACCGGCACGGCGATGCTCGTCGACGGCGGCGTCTCGATCAACCGGGCCTGA
PROTEIN sequence
Length: 255
MTRLDTKVAIITGASSGIGRAAALLFARQGASVVLSARGRDRLEAVAEEIRAAGGTALAVPGDVSEEAHHAALVDAAQAEFGGLDIAFNNAGTTGPVGALPELSMAAWQTVLDINLTSGFLAAKYQLPAMEARGGGSIVFTSTFVGYTAGFPGLAAYAASKSGLVGLVQVLACEYGPKGIRVNALLPGATDTPMGRHVANTPEVLQFVAGLNAFKRIAEPEEIAQAALFLCSPASSFTTGTAMLVDGGVSINRA*