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SCNpilot_expt_1000_bf_scaffold_7192_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1836..3293)

Top 3 Functional Annotations

Value Algorithm Source
Helicase/glycosylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY40_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 483.0
  • Bit_score: 758
  • Evalue 5.10e-216
  • rbh
Helicase/glycosylase {ECO:0000313|EMBL:EYR84466.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 483.0
  • Bit_score: 758
  • Evalue 7.10e-216
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 485.0
  • Bit_score: 624
  • Evalue 2.70e-176
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGCACAGGGTTTGCCTTGTCGGGCGCGGCGATCTTTCCGAATGGCGGGACGCGGCCCGCGCGCTCGCCGCCGCCGGCCTTTCGCCGCAGCAGGTGGATTGGCGGATCGGCGGGGCGGAAGACGAGTTGTTCGAAGCCGCGCCGGACCTGCCGAAGCCCGATCCGGCGGCCGCGCCGCTGACCGTCCCCGCGGGTTTCCTTTCCCTGGCCGAGGCGGTCGCGTGCCATACGGAGCCCGGCCGCTTTCATCTCCTGTACCGGCTGCTCTGGCGCCTGCAATCGGACAGGCGCCTGCTGGAGCTTACGGCGGACAAGGATGTCGCCTGGGCGCGGCTTCTGGCGAAGAACGTGCATCGCGACAGCCACAAGATGACGGCCTTCGTGCGCTTCAAGGAGATCACCGGGCAGGCGGAGGGGCGCCGCCGCTTCTTCGCCTGGTTCGAGCCGTCGCATTTCGTCGTCGCCCGGACCGCGCTGTTCTTCCGCCGGCGTTTTGCCGACATGGACTGGATCATCGCCACGCCGCGGGGAACGGCGAGCTGGGATGGCGAAAGCCTGATCTTCGACACGCGCCCCGGCGAAAATCCCGGCCATGGTGATCCGACGGACGAACTCTGGCGCACCTACTATGCCAGCATCTTCAATCCGGCCCGGCTGAAGCTGAAGGCCATGCAGGCGGAAATGCCGAAGAAATACTGGCGCCACCTGCCGGAGGCGGACCTGATCCCCGAGCTCATCGCCAATGCCGAGGCGAATGTGCGGGCCATGGCCGAGCGCGCCGCCAGCGATCCGCCGCCCTTCCACCATCGCCTGCAGGAGGCGGCCCGCACCTTGCCGCCGCATATGCCGGCAGACGCCGGCACGGTCGGGGCCTTGCGCGAGGCGGCGCGGGGCTGCAAGCGCTGCCCATTGCATTGCGCCGCGACACAGACCGTTTTCGGGGAGGGGCCGCAGGAGGCGCGGATCATGATGGTGGGCGAGCAGCCGGGCGACCAGGAGGACCTTGTCGGCCGTCCCTTCGTCGGCCCGGCAGGCAAGGTGCTCGATACGGTGCTGAAGGAGGCGGGCATTGCCCGCGAGACGCTTTACCTCACGAATGCGGTGAAGCACTTCAAATATGTGCCGCGCGGCAAGCGCCGCATTCACGAAAGGCCGAACCGGGGCGAGATCGAGCATTGCCGCTGGTGGCTGGCGAAGGAGATGGAAATGGTGAAGCCGAGCCTCGTCGTCGCGCTCGGGGCCACCGCGCTCTATGCGCTGAGCGGGCAGCAGGGACCGCTGAGCCGGCTGCGCGGCAAGCCGATCGCGATGCAGGACAATATCGTGCTCTACCCGACCGTCCACCCGTCCTTCCTGCTGCGCCTGCCCGACGAGGCGGAACGCCGCCGCCAGCACGGCCTCTTCGTCGAGGACATGAAGACCATAGGGCATCTGGCGGAGAGACTTGCCGCCCAATGA
PROTEIN sequence
Length: 486
MHRVCLVGRGDLSEWRDAARALAAAGLSPQQVDWRIGGAEDELFEAAPDLPKPDPAAAPLTVPAGFLSLAEAVACHTEPGRFHLLYRLLWRLQSDRRLLELTADKDVAWARLLAKNVHRDSHKMTAFVRFKEITGQAEGRRRFFAWFEPSHFVVARTALFFRRRFADMDWIIATPRGTASWDGESLIFDTRPGENPGHGDPTDELWRTYYASIFNPARLKLKAMQAEMPKKYWRHLPEADLIPELIANAEANVRAMAERAASDPPPFHHRLQEAARTLPPHMPADAGTVGALREAARGCKRCPLHCAATQTVFGEGPQEARIMMVGEQPGDQEDLVGRPFVGPAGKVLDTVLKEAGIARETLYLTNAVKHFKYVPRGKRRIHERPNRGEIEHCRWWLAKEMEMVKPSLVVALGATALYALSGQQGPLSRLRGKPIAMQDNIVLYPTVHPSFLLRLPDEAERRRQHGLFVEDMKTIGHLAERLAAQ*