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SCNpilot_expt_1000_bf_scaffold_7192_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4550..5515)

Top 3 Functional Annotations

Value Algorithm Source
Short chain alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EJQ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 321.0
  • Bit_score: 584
  • Evalue 5.10e-164
  • rbh
Short chain alcohol dehydrogenase {ECO:0000313|EMBL:EYR78006.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 321.0
  • Bit_score: 584
  • Evalue 7.10e-164
short chain alcohol dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 320.0
  • Bit_score: 482
  • Evalue 1.50e-133
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAGCCAGAGCCAATCCGCCCGCACGGCGGCAAAACAGCGCGAGATCCAGAAAGAGGTGGCGAAGGCCGACAGCAAGGGCGCAGGGGACGAGCCCAAGGCGATGCAGGCCGGTGCGCGGCTTTATCCGGTTCCGCCCTTTCCCAAGCAGCATCAGCCGAAGCCCGGCCATGAAGCCGCGCTCGATCCGCCGCCGATGTACGACGCGCCCTTCTACAAGGGATCGGAGAAGCTGAAAGGCAAGGTGGCGCTCGTCACGGGGGGCGATTCCGGTATCGGCCGGGCGGTCGCCGTGCTCTTCGCCCGCGAGGGAGCGGATGTGGCGATCGCCCATCTTGCGGAAGGAAGGGACGCGCGGGACACCATCGCGGCCGTCGAGGCGGAGGGGCGGCGCTGCATCGCCTTTGCCGGCGACGTCAAGGAGAAGGCCTTCTGCGCGGATACCGTGAAATGCGTCGTGCAGGACCTCGGCCGGCTCGATATCCTGGTGAACAACGCCGCGTTCCAGGTTCACAGCAAGGATATCCTCGATCTTTCCGAGGCGCATTTCGACGAGACGCTGAAGACCAATCTCTACGGCTATTTCTTCATGGCGCAGGCGGCGGTGCCGCATATGGCGCCGGGTTCGGCGATCATCAATACGGGGTCGGTCACGGGCCTGGAGGGATCGAAGAACCTGCTCGACTATTCGATGACGAAGGGCGGCATCCATGCCTTCACGCGCTCGCTCGCCGGCCAGCTCGTGCCGCGCGGCATCCGCGTCAATGCCGTGGCGCCGGGGCCGGTCTGGACGCCGCTCAACCCCTCCGACAAGGAGGCCGAAGACGTCGCGGAATTCGGTGCGCAGACGCCGATGAAGCGCCCCGCCCAGCCGGAAGAGCTGGCGCCGGCCTATGTCTTCCTCGCCTCGCCGCAGTGCTCCAGCTACATCACGGGAGAAGTGCTCCCGATCATCGGCGGCTATTGA
PROTEIN sequence
Length: 322
MSQSQSARTAAKQREIQKEVAKADSKGAGDEPKAMQAGARLYPVPPFPKQHQPKPGHEAALDPPPMYDAPFYKGSEKLKGKVALVTGGDSGIGRAVAVLFAREGADVAIAHLAEGRDARDTIAAVEAEGRRCIAFAGDVKEKAFCADTVKCVVQDLGRLDILVNNAAFQVHSKDILDLSEAHFDETLKTNLYGYFFMAQAAVPHMAPGSAIINTGSVTGLEGSKNLLDYSMTKGGIHAFTRSLAGQLVPRGIRVNAVAPGPVWTPLNPSDKEAEDVAEFGAQTPMKRPAQPEELAPAYVFLASPQCSSYITGEVLPIIGGY*