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SCNpilot_expt_1000_bf_scaffold_3001_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8056..8583)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D086_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 168.0
  • Bit_score: 292
  • Evalue 3.70e-76
Uncharacterized protein {ECO:0000313|EMBL:EYR78623.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 168.0
  • Bit_score: 292
  • Evalue 5.20e-76
putative lipid carrier protein-like protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 162.0
  • Bit_score: 186
  • Evalue 9.00e-45

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTATCTCGCAGGGCCGCCCATGACATCGCTATCTCCGCTCCTCGCAAAACCGGTCGATCTGGCCCCGATCTGGCTGGTGGAGCGGGTGGCGCGGTCCATTTTCGCCAGCGTCCTCAAAGCGCATCCCGATGTGTTCGAGCGACTCGATACCTACCGGCAGACCCGCTACGGCTTCTCGCCGACCGATCTGCGGCTGCATTTCACCGTCGTCCCGGCGACGCGGACGCTGGCCGTCTCGCGCGGCCAGCCGCCCCTTTCGGATGCGCGCATCGAGGGGCCGCTGGTGCTGCTGCTCGGGCTCCTGGAGGGGCGGTGCGATGCCGATGCGCTGTTCTTCTCGCGCGAGCTTTCCGTCACCGGCGACATGGAGGCGATGCTGGCGCTGCGCAATGCGCTCGACGACAGCGCCATCGACCTGCCGCGCGAGCTCGGCGCCCTTGCCGGGCCGTTCTCGCCGCTGGTCGCCGGCACGGCGCGCTACATCCGCAGCAAGGCGCTCGAAGGAAGGGATGCGACATGGAACTGA
PROTEIN sequence
Length: 176
MYLAGPPMTSLSPLLAKPVDLAPIWLVERVARSIFASVLKAHPDVFERLDTYRQTRYGFSPTDLRLHFTVVPATRTLAVSRGQPPLSDARIEGPLVLLLGLLEGRCDADALFFSRELSVTGDMEAMLALRNALDDSAIDLPRELGALAGPFSPLVAGTARYIRSKALEGRDATWN*