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SCNpilot_expt_1000_bf_scaffold_3001_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 10149..10736

Top 3 Functional Annotations

Value Algorithm Source
3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein UbiX n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 195.0
  • Bit_score: 306
  • Evalue 1.60e-80
  • rbh
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 195.0
  • Bit_score: 306
  • Evalue 2.30e-80
bsdB; phenolic acid decarboxylase subunit B (EC:4.1.1.- 4.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 188.0
  • Bit_score: 253
  • Evalue 3.90e-65

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAACACCGTGCGCGTTGTCGTCGGCATATCCGGCGCATCCGGCGCGGCGCTCGGCGTGCGCATCACGGAACGGCTGGCGGCGATGCCCGGCGTCGAGACGCACCTCGTCGTCTCGGATGCCGCGCGGCGCACGCTCGACCTCGAATGCCCGCCCGGCGCGCTGGCGCGTCTCGAAACGCTCGTCCACCGGCACCATCCGAACGAGGACATCGGCGCCTCGATCGCCAGCGGCTCCTTTCCCGTCCGCGGCATGATCGTCGCGCCCTGCTCGATGCAGACGCTTTCGGCCATCGCCACCGGCCGCACCGACACGCTGCTGACGCGCGCGGCCGACGTGCAGATGAAGGAGCGCCGACGGCTGGTGCTGCTGGCGCGCGAAACGCCCCTCCATCTCGGCCACCTGCGCAACATGTGCGCGGTCACGGAAATGGGGGCCATCGTCATGCCGCCGGTGCCGGCCTTCTATCATCGCCCGCAGTCCGTCGCAGAGATCGTCGACCATCTCGCCGCCCGCGCGATCGACCTCATCGCCGTCGCGCCGGCTCCCCTTGCCGAGAGCTGGACGGGCACTGACGAGGCCGGTTGA
PROTEIN sequence
Length: 196
MNTVRVVVGISGASGAALGVRITERLAAMPGVETHLVVSDAARRTLDLECPPGALARLETLVHRHHPNEDIGASIASGSFPVRGMIVAPCSMQTLSAIATGRTDTLLTRAADVQMKERRRLVLLARETPLHLGHLRNMCAVTEMGAIVMPPVPAFYHRPQSVAEIVDHLAARAIDLIAVAPAPLAESWTGTDEAG*