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SCNpilot_expt_1000_bf_scaffold_3001_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14612..15652

Top 3 Functional Annotations

Value Algorithm Source
putative sugar ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 344.0
  • Bit_score: 576
  • Evalue 4.70e-162
  • rbh
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYV9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 344.0
  • Bit_score: 576
  • Evalue 1.50e-161
  • rbh
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EMS95466.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 347.0
  • Bit_score: 576
  • Evalue 2.10e-161

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAATGCAATCCTGAAATCCCTGACCGGCGCCGTCGCGGGCGCCCTGCTTGCAGCCGGCACGGCCGCGGCCGGCGGCATCGCGGGCGCACCGGCGCCCTTCGACAAGGGCGATGTCGACATCGCCGTCGTCAGCTTCCTCGGCTCCGGCGACTGGCTTCAGGCCTTCGAGGCCGGCGTGAAGCGCCAGGCCGACGCGCTCGGCGTCAAGCTGACGATCTCGCAGGCGCGCAACGACAACGACACCCAGCGCAGCCTGATCGAACAGGCGATCAACCTCGGCGTCGATGGCATCATCATCAACAACGGCCGCCCGGAAGTGCTGCAGGACGTCGCCCAGAAGGCGCTCGACGCCGGCATCAAGGTGGTCGCCTACGACGTGAACCTCGACAACGAGCAGATCCCGCAGATCGAGCAGTCGGACGCCGACATGGCCCGCCTCGTCCTGGAGCAGGCGGTGAAGGACAAGGGCGACGGCTTCGTCGGCGGCGCCGTCTATGTCGCCGGCTTCGCGCCGCTCGACCGCCGCTACGCCGTCTGGCAGGACTTCGTGAAGAAGCACAACCTCACGGAGAAGGCCGTCTGGGGCGTCGTCAACGACACCGTCCCGGCCTCCGTCGCCGACCAGACCAAGGCGATCCTGCGCGCCAACCCGGACATTTCCGTCATCTTCACGCCGTGGGACGAGTTCGCCAAGGGCGTCAAGCTCGCCATCGACGAGCTCGGCGTCTCGCAGAACGTCAAGATCTACGGCGTCGACATCTCGACGGCCGACATCCAGCTCATGGCCGAACCGGACAGCGCCTGGGCCGCGACCGCCGCGACCAACGCCGCCGTCGTCGGCGAGGTTTCCGTGCGTGCGGTCTCGCTGGCGATCGCCGGCCAGTTTCCCGGCCGCTCGGTCCTGCTCCAGCCGACGCTCGTCACCCGCGACGACCTCGTGAAGAACGAGATCTCGACGATCGAGGAGTTGCAGCAGAAGTTCCCGGCCTTCCTGAAGAGCGATGCGGCCACCGCATCCTGGATCCCGGCCCTCAACTGA
PROTEIN sequence
Length: 347
MNAILKSLTGAVAGALLAAGTAAAGGIAGAPAPFDKGDVDIAVVSFLGSGDWLQAFEAGVKRQADALGVKLTISQARNDNDTQRSLIEQAINLGVDGIIINNGRPEVLQDVAQKALDAGIKVVAYDVNLDNEQIPQIEQSDADMARLVLEQAVKDKGDGFVGGAVYVAGFAPLDRRYAVWQDFVKKHNLTEKAVWGVVNDTVPASVADQTKAILRANPDISVIFTPWDEFAKGVKLAIDELGVSQNVKIYGVDISTADIQLMAEPDSAWAATAATNAAVVGEVSVRAVSLAIAGQFPGRSVLLQPTLVTRDDLVKNEISTIEELQQKFPAFLKSDAATASWIPALN*