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SCNpilot_expt_1000_bf_scaffold_3001_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(18873..19796)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1R3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 306.0
  • Bit_score: 572
  • Evalue 3.30e-160
  • rbh
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77484.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 306.0
  • Bit_score: 572
  • Evalue 4.60e-160
ABC transporter; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 311.0
  • Bit_score: 549
  • Evalue 9.30e-154
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGACTCATGCTGCCTATCACCCGGCCACGCGGCCGTTCAGAAAGCGGTTCGCCGATGCTGCGGAGCCCTATCTCTACAGCGCGCCGGCGCTGATCCTGATCGTCGCCGTGATGCTGGTGCCGCTGGTGCTCGGCATTTCCTACGCATTCCGCGATATCCAGCTTCTCAATCCCTTTTCCGGCGGCTTCATCGGGCTCGATCATTTCCGGGCGCTGGGGCAGGACCAGGCCTTCTTCCGGGCTCTCCGCAACACGCTCTGGTGGACGGGCGCCTCGGTCTTCCTGCAATTCGTCTTCGGGCTCATCCTCGCGCTGCTGCTGGACAAGCCCTTTGCCGGCCGCGGGCTGGCGCAGGCGCTCTGCTTCCTGCCTTGGGCGGTGCCCAGCTTCCTTGCCGGCCTCAACTGGGCCTGGCTCTTCAACCCTGTCATCGGTCCGCTGCCGCACTGGATGTACGCCTTCGGCATTCTCGACGCGCCCAACAACATCCTGTCCGATCCGCAGCTTGCCATGTGGGGGCCGATCATCGCCAATGTCTGGTGGGGCATTCCGTTCTTCGCGATCACCCTGCTTGCCGCGCTGCAGGCGATCCCGCGCGATCTCTATGAAGCCGCGAGCATCGACGGGGCAGGGCCGGTCCAGCGTTTCGTCTCGATCACGCTGCCGTTCCTCGCGCCCACCATCGCTATCACCATCCTCCTGCGCACCGTCTGGATCTCCAACTTCGCCGACCTCATCGTCGTCATGACGAATGGCGGGCCGGCCGACCGCACGCAGATCGTCGCGAGCTACATCTTCACCCAGGCCTTCAAGCGGCTGGATTTCGGCTATGCCTCGGCCATCGCGCTCGTGCTGCTCGTCCTGCTTCTCGTCTATTCGCTGCTGATCGTGCTTCTGCGCCAGACGCTGCTCAACAAGGACTGA
PROTEIN sequence
Length: 308
MTHAAYHPATRPFRKRFADAAEPYLYSAPALILIVAVMLVPLVLGISYAFRDIQLLNPFSGGFIGLDHFRALGQDQAFFRALRNTLWWTGASVFLQFVFGLILALLLDKPFAGRGLAQALCFLPWAVPSFLAGLNWAWLFNPVIGPLPHWMYAFGILDAPNNILSDPQLAMWGPIIANVWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPVQRFVSITLPFLAPTIAITILLRTVWISNFADLIVVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLVLLLVYSLLIVLLRQTLLNKD*