ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4021_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4206..5129)

Top 3 Functional Annotations

Value Algorithm Source
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 307.0
  • Bit_score: 618
  • Evalue 7.30e-174
homoserine O-succinyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI0003735BCA similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 306.0
  • Bit_score: 557
  • Evalue 6.30e-156
  • rbh
metA; homoserine O-succinyltransferase; K00651 homoserine O-succinyltransferase [EC:2.3.1.46] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 304.0
  • Bit_score: 553
  • Evalue 4.90e-155
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCCCATCAAGATTCCCGATACGCTCCCTGCCTTCCAGACCCTCGTCGACGAGGGTGTGCGGGTGATGACCGAAACGGTGGCGATCCGGCAGGACATCCGCCCGCTGCAGATCGGGCTGCTCAACCTCATGCCGAACAAGATCAAGACGGAAGTGCAGATGGCGCGCCTCGTCGGTGCCTCGCCGCTGCAGGTCGAGCTGTCGCTGGTGCGCGTCGGCGGCCACCGCGCCAAGAATACGTCGGAAGACCATCTGCTCGCCTTCTACGATACGTGGGAGGAGGTGAAGCACCGCAAGTTCGACGGCTTCATCATCACCGGAGCGCCGGTGGAGACCCTCGACTACGAGGACGTCACCTACTGGGACGAGATGAAGCAGATCCTCGACTGGACGAAGACCAACGTCCATTCGACGCTCAATGTCTGCTGGGGCGCCATGGCGGCGATCTATCATTTCCACGGCGTGCCCAAGCGCACGCTGGAGGAGAAGGCCTTCGGCGTCTACCGCCACCACAACCGGAAGCCCTCGTCGGTCTATCTCAACGGCTTCTCGGACAATTTCGAGGTTCCCGTCTCGCGCTGGACGGAAATCCGCATCGAGGACATCCGCGCGGTGCCGGAACTCGACATCCTGCTCGATTCCGACGAGACGGGCGTCTGCCTCGTGCAGGAGAAGGCGGGCAACCGGCTCTACATCTTCAACCACGTCGAATATGATTCGACCTCGCTCGCCGAGGAATATTTCCGCGACGTCTCGGCCGGCGTGCCGATCAAGCTGCCGAAGAACTATTTCCCGCACAACGATCCGTCGCTGCCGCCACAGAACCGCTGGCGCGGCCATGCGCACCTGCTGTTCGGCAACTGGATCAACGAGATCTACCAGACCACGCCCTACGACCTTGAAGAAATCGGAACGGGGGCCTGA
PROTEIN sequence
Length: 308
MPIKIPDTLPAFQTLVDEGVRVMTETVAIRQDIRPLQIGLLNLMPNKIKTEVQMARLVGASPLQVELSLVRVGGHRAKNTSEDHLLAFYDTWEEVKHRKFDGFIITGAPVETLDYEDVTYWDEMKQILDWTKTNVHSTLNVCWGAMAAIYHFHGVPKRTLEEKAFGVYRHHNRKPSSVYLNGFSDNFEVPVSRWTEIRIEDIRAVPELDILLDSDETGVCLVQEKAGNRLYIFNHVEYDSTSLAEEYFRDVSAGVPIKLPKNYFPHNDPSLPPQNRWRGHAHLLFGNWINEIYQTTPYDLEEIGTGA*