ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4021_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7165..7830)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphokinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY07_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 221.0
  • Bit_score: 370
  • Evalue 1.40e-99
  • rbh
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EYR79639.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 221.0
  • Bit_score: 370
  • Evalue 1.90e-99
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 215.0
  • Bit_score: 300
  • Evalue 4.10e-79
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGACCATGCCGGCAACCACAGACCAGACCTTCGTCGTCCTCCTCGGCGGCGCGCTCACCGTGACGCCGCGTCTTCGCGCGGACATGACGGGCGCGCGCGTCGTGGCGGCGGATGGCGGCATGCGGCACGCGGCCTGCCTCGGCGTCACGCCGGAACTGTGGGTCGGCGATTTCGATTCCACCCCGCCCGAGCTCATCGCCGCCTGGCCGGATGTCGAGCGGCAGCCCTGGCCGGCCGCCAAGAACGAGACGGACGGTGCCATCGCGGTCTCCGCCGCCGCCGAACGGGGTGCGCGCAGGATCGTCCTTGCCGGCGCGCTCGGCGGCGAGCGCAGCGATCACGCCATGATGCACCTCGTCCATGCCGTCTTCCTGGAGGAGGAGGGCTTTTCCATCAAGCTCACCTCGGGTGAGGAGGAGGCGTGGCCGCTGCTGCCGGGCACGCGCGAGATCGACCTGCCGAAGCACAGCCTCTTCTCCGTCCTCGGCCTTTCGCCGCTCTCCGGCCTCTTCATCGACAACGTGCGCTATCCGCTCGCCGATTTCGCGCTGCCCTTCGGCTCGTCCCGCACCATCTCCAATGTCGCGGAAGGCCCGATCCGCCTTTCGCTCGCCTCCGGCCGTGCGCTCCTCATCGCCCGGCCCTATGACTTTTCAGGAGCCTGA
PROTEIN sequence
Length: 222
MTMPATTDQTFVVLLGGALTVTPRLRADMTGARVVAADGGMRHAACLGVTPELWVGDFDSTPPELIAAWPDVERQPWPAAKNETDGAIAVSAAAERGARRIVLAGALGGERSDHAMMHLVHAVFLEEEGFSIKLTSGEEEAWPLLPGTREIDLPKHSLFSVLGLSPLSGLFIDNVRYPLADFALPFGSSRTISNVAEGPIRLSLASGRALLIARPYDFSGA*