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SCNpilot_expt_1000_bf_scaffold_10351_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1426..2145)

Top 3 Functional Annotations

Value Algorithm Source
Methionine synthase I n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYS0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 253.0
  • Bit_score: 411
  • Evalue 5.70e-112
  • rbh
Methionine synthase I {ECO:0000313|EMBL:EYR77792.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EYR77792.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 253.0
  • Bit_score: 411
  • Evalue 8.00e-112
bmt; betaine-homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 251.0
  • Bit_score: 378
  • Evalue 1.30e-102
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGTTCGAGCTCAACCGTAAAGCCGCGGAGATCGCCCGCGCCGTCGCCGACAAGGCGCCGCGCAAGGTCATCGTCGCCGGCTCCGTCGGCCCGACCGGCGAACTGCTCATCCCGCTCGGCGCGCTCACCTATGACGACGCGGTCGCCGCTTTCGCCGAGCAGATCGAGGGGCTGAAGGCCGGCGGCGCGGATGTCGCCTGGATCGAGACGATGTCCTCGCCGGAGGAAATCCGCGCGGCGGCGGAAGCGGCCGGCAAGGCCGGCATGCCCTTCGTCTATACCGGCTCGTTCGATACGGCCGGCAAGACGATGATGGGCCTGCACCCCAAGGACATCCACGGCGTTGCCGGCGACATCGGCGACGGCCCGCTTGCCGTCGGCGCGAACTGCGGCGTCGGCGCGTCCGACATCCTCTCCTCGCTGCTCGACATGACGGACGCCGATCCCTCGGCCACCGTCGTCGTCAAGGGCAATTGCGGCATTCCCGAATATCGCGGCGCGGAAATCCACTATTCCGGCACGCCGCCGTTGATGGCCGAATATGCGCGCCTTGCCCGCGATGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCGCGCGAGCGCCCGACGCTGGAAACCATCGTCGAGAAGATCGGCCCGTTGCGCAACAAGACCGCCAATGCGGGCGCTTCCGCCCCTGCCCGCGAACGCAGCCGCCGCCGGGGCTGA
PROTEIN sequence
Length: 240
VFELNRKAAEIARAVADKAPRKVIVAGSVGPTGELLIPLGALTYDDAVAAFAEQIEGLKAGGADVAWIETMSSPEEIRAAAEAAGKAGMPFVYTGSFDTAGKTMMGLHPKDIHGVAGDIGDGPLAVGANCGVGASDILSSLLDMTDADPSATVVVKGNCGIPEYRGAEIHYSGTPPLMAEYARLARDAXXXXXXXXXXXXEPRERPTLETIVEKIGPLRNKTANAGASAPARERSRRRG*