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SCNpilot_expt_1000_bf_scaffold_10351_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2505..2744)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine transport ATP-binding protein OpuAA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU63_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 79.0
  • Bit_score: 140
  • Evalue 6.30e-31
Glycine betaine transport ATP-binding protein OpuAA {ECO:0000313|EMBL:EYR77791.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EYR77791.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 79.0
  • Bit_score: 140
  • Evalue 8.80e-31
opuAA2; glycine betaine transport ATP-binding protein OpuAA (EC:3.6.3.32) similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 80.0
  • Bit_score: 103
  • Evalue 3.50e-20

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGAACCGCGGCCGCGTGGTCAATGTCGAGACGATCATGGCCCCGCTCTCCGGCAACCCGGAAGGCATGCCGATCACCAAGGGCACCGTGCTGGAAACCGCCGCCCGCGCCATGACCGCCGCCAACCAGACGCTCGCCCATGTGGTCGACGAGGCCGGCAAGCCGATCGGCGCGGTCAGCCTCAGCGCGATCATCGCCGCCATGGTGACGCAGACGAGCCACGAGGCGAAGGCGGCCTGA
PROTEIN sequence
Length: 80
VNRGRVVNVETIMAPLSGNPEGMPITKGTVLETAARAMTAANQTLAHVVDEAGKPIGAVSLSAIIAAMVTQTSHEAKAA*