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SCNpilot_expt_1000_bf_scaffold_15892_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 122..925

Top 3 Functional Annotations

Value Algorithm Source
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 5.80e-103
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003704E32 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 227.0
  • Bit_score: 324
  • Evalue 1.30e-85
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 225.0
  • Bit_score: 321
  • Evalue 2.70e-85
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAAATTTCGGGACGATGACCGGGAACGCGCGGCCTTCTGCGGCGTTTCCGCCGGCAAGTCCCGCGCCAAATCTGCGGCCCGCGGCCCGCGCCATTATGGCGCCGCGTTTGGCTCGCATGACAAACGCATGAAGGAGACCGATATGACCCGATCCGCAAAAGGCCGCGCGACCGCTTCCACGACCCGCCGCGGCTTCACCAGCCTCGTGGCCGTCGCGCTCGCAGCCGGCCTTTCGGTGCTTTCCCCCGTCGAGGCTTCCGCGCAGGCGAGCGGCACCGCGCAGAAGATCGCCGACCACTTCGCCTCGGTGAAGACGATGATGGGCGAGTTCGTGCAGTTCGGCCCGCGCGGCGAGCAGACCGGCGGCAAGTTCTATATCGACCGTCCCGGCAAGATCCGCTTCAACTACGAGGATCCCTCGCCGATGCGCGTGATCGCCGACGGCAAGTCCGTCGTCATCGGCAACCGCAAGCTCAAGACCTGGGACATCTACCCGCTCTCCAAGACGCCGCTGAACCTCCTGCTCGGCAACAAGATCGACCTTTCCACCAAAATGGTGCGCGGCGTGAAGGAGGAGGCGGACCTGACGACGATCGTGCTCGGCGACAAGAACATGTTCGGCGATTCGACCATCACCATGATGTTCGATCCGAAGACCTACGACCTGCGCCAGTGGACGATCACCGATGCGCAGGGCAAGGATACCTCCGTGATGATCTTCAACGTCAAGACCGGCGTGCCGCTCGACGACAAGGTCTTCGCCATCCCCTATGAGGAAATCCGCAACCGCGGCGCCCGGTAA
PROTEIN sequence
Length: 268
MKFRDDDRERAAFCGVSAGKSRAKSAARGPRHYGAAFGSHDKRMKETDMTRSAKGRATASTTRRGFTSLVAVALAAGLSVLSPVEASAQASGTAQKIADHFASVKTMMGEFVQFGPRGEQTGGKFYIDRPGKIRFNYEDPSPMRVIADGKSVVIGNRKLKTWDIYPLSKTPLNLLLGNKIDLSTKMVRGVKEEADLTTIVLGDKNMFGDSTITMMFDPKTYDLRQWTITDAQGKDTSVMIFNVKTGVPLDDKVFAIPYEEIRNRGAR*