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SCNpilot_expt_1000_bf_scaffold_15892_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1062..1868

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease III n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EHE4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 268.0
  • Bit_score: 539
  • Evalue 2.70e-150
  • rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EYR79657.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EYR79657.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 268.0
  • Bit_score: 539
  • Evalue 3.70e-150
xthA3; putative exodeoxyribonuclease III protein; K01142 exodeoxyribonuclease III [EC:3.1.11.2] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 268.0
  • Bit_score: 470
  • Evalue 4.80e-130
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGACACTTTCGATCGCGACGTGGAACATCAACTCGGTGCGGCTGCGCATGCCGCTCGTCGAGCATTTCCTCAAGACCTATTCGCCTGACGTCCTGTGCCTGCAGGAGACGAAGTGCCCGAACGACCAGTTCCCTTCCAAGCCCCTGAAGGCGCTCGGCTACGAGCATATCGTCATGCATGGCCAGAAGGGCTATCACGGCGTCGCCACGGTCTCCCGCCTGCCGCTGACCGAGCTGGTCGAGCGGCGCGACTATTGCGGCGTCGGCGACGCGCGGCATGTCTCGGTGGTCTTCCACCACCGCGGCAAGTCGATCCGCCTGCACAATTTCTATGTGCCGGCCGGCGGTGACGATCCGGATCGCACGATCAACCCGAAATTCGGCCACAAGCTCGATTTCATCGAGGAGATGAAACTGCTGCACGCGGAAGCGGAGGCCGGCATCTCCTCCATCCTCGTCGGCGACCTCAACATCGCGCCGCTGGAGCATGACGTCTGGTCGCACAAGCAGCTCCTGAAGATCGTCAGCCACACGCCCATCGAGACCGAAGGCCTGATCGACGTGATGACCAAGGGTGCCTGGGTGGACCTGATGCGCCGCAAGGTGCCGGCGGAGGAAAAGCTCTATACGTGGTGGAGCTACCGCTCGGCCGACTGGCAGGCCGCCAACAAGGGCCGCCGCCTCGACCATATCTGGTCCTCCGCCGACCTCGATCCGCACCTCACCGGCATTTCTGTGATCCGCGAGGCGCGCGGCTGGGAACGGCCGTCCGACCATGTGCCGGTCATCGCGGAATTCGATTTCTGA
PROTEIN sequence
Length: 269
MTLSIATWNINSVRLRMPLVEHFLKTYSPDVLCLQETKCPNDQFPSKPLKALGYEHIVMHGQKGYHGVATVSRLPLTELVERRDYCGVGDARHVSVVFHHRGKSIRLHNFYVPAGGDDPDRTINPKFGHKLDFIEEMKLLHAEAEAGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPIETEGLIDVMTKGAWVDLMRRKVPAEEKLYTWWSYRSADWQAANKGRRLDHIWSSADLDPHLTGISVIREARGWERPSDHVPVIAEFDF*