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SCNpilot_expt_1000_bf_scaffold_9512_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1..1557)

Top 3 Functional Annotations

Value Algorithm Source
Succinoglycan biosynthesis transport protein ExoP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3V1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 527.0
  • Bit_score: 826
  • Evalue 1.20e-236
  • rbh
Succinoglycan biosynthesis transport protein ExoP {ECO:0000313|EMBL:EYR81347.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 527.0
  • Bit_score: 826
  • Evalue 1.70e-236
putative transmembrane succinoglycan biosynthesis transport protein similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 515.0
  • Bit_score: 640
  • Evalue 5.20e-181
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGTCGGGCGTTCACGAAAGCCAGCAGGATGTCGATATAGACCTTGGCGGTCTGTTCGGCTCGATCTGGCGCAACCGCATGCGGGTGCTTCTGGCGACCGTCGCCTGCGCGGGCATCGCCTTTGCCGGCGCGAACCTGGTCACGCCGAGATACAAGGGCGAGGCGCGCCTGCTCATCGAAACGCGCGAACCGGCCTTCACGACGGGCCAGGACCGGGCGCAGGGCCGTGACCAGCCCGCCTTCGACGAGCTGGGCATCGCCAGCCAGGTCCAGCTCCTGCAGTCGGCCGACCTCATCAAGCAGGTCGCCCGCGACATGAAGCTCTACGAGCTGGAGGAATTCGACACGACGGCCAAGCCGTCTGCCGTTTCCGACCTGCTCGTGCTGCTCGGCCTGAAGAAGAACCCGCTCGACCTTCCGCCGGAAGAGCGCGTGCTGAAGGAGTTCGCGGGAAAGCTCGTCGTCTACCAGGTGGAGCGCTCGCGCGTCATCGGCATCGAGTTCACCTCGAAGGACCCGCGCCTAGCCGCGGCAATCCCGAACGAGATGGCCAAGGTCTATCTCTCGCTCCAGAGCGGGGCCAAGCTCGACGCCAATTCCGAGGCGACGCGCTGGCTGGAGCCGGAAATCGCCAACCTGCGCGAGAAGGTGCGCGAGGCCGAGCAGAAGGTCGCCGAATACCGTTCGCAATCAGACCTCCCGCCGACCGGCGACAGCGCGACCTTCGCGATGCGGCAACTCAACGACATCTCGACGGAAGTCGCCCGCGTGCGCGGCGAGCGGGCGAGCGCGGAGGCGCGTGCCGAAAGCGTACGTGCCGTGCTGAAGAACGGCGGGGCGCCGGATACGCTCTCCGAGGTCGTCGGCTCGCAGATGATCCAGCGCCTGAAGGAGAGCGAGGCGCAGATCCAGGGCCAGATCTCCGACCTTTCCACCTCGCTCCTCGAAGGCCATCCGCGGCTGAAGGGGCTGCGCTCGCAGCTTGCCGGCATCCGGACGCAGATCAAGGCGGAAACGCAGAAGATCCTTTCGAGCCTCGAAAACGAGGCGAAGACGGCGCGGCTGCGCGAAAGCCAACTCATGCAGCAGCTCAACACGCTGAAAGCCGAGACCGCCCGCGCCGGCGAGGACGAGGTGGGCCTGAAAGCGCTGGAGCGCGAGGCGACCGCCCAGCGCCAGTTGCTCGAAACCTATCTGGCGCGCTACCGCGAGGCGACCTCGCGCACCGACAGCAGCTCGACGCCGGCCGATGCCCGCGTCATTTCCGCCGCCGTCGAGCCGACGGACGTCTCCTTCCCGAAGGTGGTTCCGATCACCGTCGTCGGCGGTGTCGTGGGCTTTGCGCTGAGCGCCATCGTCATCCTTCTGGCCGAGCTTTTCAGCGGGCGCGCCCTCAAGCCTGTCGGCGCCGCTGCCGCCATGCCCCGCCGCCGCGACGAGGATGTGGAGGAACTGGCGGAACCCGTGGCGCCGGACAACGAGCCCTTCGCCGCGAAGGGTCCGGCGGCCCGCCCGGAATACGGCGCCGTCAGGGATATGGGCGCGCCGGCAAGGTCG
PROTEIN sequence
Length: 519
MSGVHESQQDVDIDLGGLFGSIWRNRMRVLLATVACAGIAFAGANLVTPRYKGEARLLIETREPAFTTGQDRAQGRDQPAFDELGIASQVQLLQSADLIKQVARDMKLYELEEFDTTAKPSAVSDLLVLLGLKKNPLDLPPEERVLKEFAGKLVVYQVERSRVIGIEFTSKDPRLAAAIPNEMAKVYLSLQSGAKLDANSEATRWLEPEIANLREKVREAEQKVAEYRSQSDLPPTGDSATFAMRQLNDISTEVARVRGERASAEARAESVRAVLKNGGAPDTLSEVVGSQMIQRLKESEAQIQGQISDLSTSLLEGHPRLKGLRSQLAGIRTQIKAETQKILSSLENEAKTARLRESQLMQQLNTLKAETARAGEDEVGLKALEREATAQRQLLETYLARYREATSRTDSSSTPADARVISAAVEPTDVSFPKVVPITVVGGVVGFALSAIVILLAELFSGRALKPVGAAAAMPRRRDEDVEELAEPVAPDNEPFAAKGPAARPEYGAVRDMGAPARS