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SCNpilot_expt_1000_bf_scaffold_9512_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1757..2332

Top 3 Functional Annotations

Value Algorithm Source
Putative polysaccharide export protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ50_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 191.0
  • Bit_score: 346
  • Evalue 2.40e-92
  • rbh
Putative polysaccharide export protein {ECO:0000313|EMBL:EYR81348.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 191.0
  • Bit_score: 346
  • Evalue 3.30e-92
polysaccharide export system protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 191.0
  • Bit_score: 293
  • Evalue 4.40e-77

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGGATTCGCAACCTTCAAAAAGGGCATGCTGCTCGCAATGGCGCTCGTCGTGCCGGCCGTTTCGGCCTGCAGCGGCTATCGCCCCGCCCCCAAGGCCTTCCACGAGGCGACGATCCAGCCCTACAGCCTGGACAGCGGCGATCGCCTGCGCATTACGGTGTTCGAACAGACGGGCCTCAGCAACACCTATACCGTCGACCAGGCCGGCTATGTCGCCTTCCCGCTCATCGGCGCCGTGCCGGCGCGCGGCCAGACGATCCAGCAACTGGAGAGCACCATCGCGGCAAAGCTGCGCCAGGGGTATCTGCGCGATCCCGACGTCTCCATCGAGGTCGACCGCTACCGCTCCATCTACATCATGGGCGAAGTCGGCCAGGCCGGGCAGTACAGCTATGTCGCCGGCATGACGATCCAGAACGCCATCGCCGTCGCCGGCGGCTTCTCGCCGCGCGCCAACCAGCGCGACGTCGACGTGACACGCAAGATCAACGGAAAGATCATCACCGGACGCGTCTCCATCTCTGACCCGATCCTGGCCGGCGACACCGTCTATGTCCGCGAACGACTGTTCTGA
PROTEIN sequence
Length: 192
MGFATFKKGMLLAMALVVPAVSACSGYRPAPKAFHEATIQPYSLDSGDRLRITVFEQTGLSNTYTVDQAGYVAFPLIGAVPARGQTIQQLESTIAAKLRQGYLRDPDVSIEVDRYRSIYIMGEVGQAGQYSYVAGMTIQNAIAVAGGFSPRANQRDVDVTRKINGKIITGRVSISDPILAGDTVYVRERLF*