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SCNpilot_expt_1000_bf_scaffold_7280_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6154..6819

Top 3 Functional Annotations

Value Algorithm Source
Putative phosphoglycolate phosphatase Gph n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUR4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 221.0
  • Bit_score: 418
  • Evalue 3.30e-114
  • rbh
Putative phosphoglycolate phosphatase Gph {ECO:0000313|EMBL:EYR79860.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EYR79860.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 221.0
  • Bit_score: 418
  • Evalue 4.70e-114
gph2; phosphoglycolate phosphatase (EC:3.1.3.18) similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 221.0
  • Bit_score: 321
  • Evalue 1.70e-85
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCGGCTCGTTCTTTTCGATTGCGACGGCACGCTGGTCGACAGCGTGAAGCTGATCCATGAAGTCATGGCCCGCACTTTCGTCGATTTCGGCCATGCGCGGCCCGATGTTTCCGAGACCAAGGCGATCATCGGCCTGACGCTCGACATCGCCATCGCCCGCATGCAGGGCAAGCCGCATGTCGATGACGAGGCGCTGGCGATGACCGCGCATTACAAGGCGATCTTTACCGGCGTGCGCGCCGAGGCGGGTTTCCAGGAACCGCTCTTTCCCGGCATCGCCGAGATGATGGCGCGGCTGGAGCGGGAGGACGACCTGATCCTCGGCGCGGTCACGGGAAAATCCCGCCGCGGCCTCGACCTCATCCGCGCCACGCACGGCTTCGAAAAGACCTTCTTCGTCTCGCGCACGGCGGACGACTGCCCCTCCAAGCCGCACCCCGCCATGGTGACGGAATGCTGCGGCGAGGCGGGCGTCGATGCGGCCCGGACGGTTGTCATCGGCGATGCGATTTACGATATGCAGATGGCGAAGGCGGCCGGCGCCAGGGCGATCGGCGTTTCCTGGGGCTATGCCTCCGTGACCGAACTGGTCGAGGCCGGCGCCGATCACATCCTGCGCACGCCCGCAGACCTTCTCGAATGGCTGGAGATTTCCGATGCGTGA
PROTEIN sequence
Length: 222
MRLVLFDCDGTLVDSVKLIHEVMARTFVDFGHARPDVSETKAIIGLTLDIAIARMQGKPHVDDEALAMTAHYKAIFTGVRAEAGFQEPLFPGIAEMMARLEREDDLILGAVTGKSRRGLDLIRATHGFEKTFFVSRTADDCPSKPHPAMVTECCGEAGVDAARTVVIGDAIYDMQMAKAAGARAIGVSWGYASVTELVEAGADHILRTPADLLEWLEISDA*