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SCNpilot_expt_1000_bf_scaffold_4811_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4290..5324)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity zinc uptake system protein ZnuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERP3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 344.0
  • Bit_score: 583
  • Evalue 1.60e-163
  • rbh
High-affinity zinc uptake system protein ZnuA {ECO:0000313|EMBL:EYR82289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 344.0
  • Bit_score: 583
  • Evalue 2.20e-163
znuA; high-affinity zinc uptake system protein ZnuA precursor; K09815 zinc transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 352.0
  • Bit_score: 458
  • Evalue 1.80e-126
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCAAAAGGCCGTTCGCACCCTCCTTCTGTCCACCGCGCTCCTTGCCGCCGGCACGCTCGCCGCGCGGGCCGAGGCGCCCGATGTGGTGGTTTCGATCAAGCCGATCCATTCGCTCGTCGCCGCGATCATGCAGGGCGTCGGCGAACCCGGCCTCATCGTCGAGGGCGCCGCCTCGCCGCACACCTATTCGCTGAAGCCCTCAAACGCGGCAGCCTTGCAGGATGCGGATGTCGTCTTCTGGGTCGGCCATGGCCTGGAAGCCTTCCTGGAAAAGCCGCTGGAAACGCTGGGCAGCAAGGCGACCGTCGTCGAGCTGGAAGATGCGCCGGGCCTCGAAAAGCTGCCTTTCCGCGAGGGCGGCCCCTTCGAGGCGCATATGCATGAAGGCGAGGACGGCCACGACCACGCCCATGAGGGCCACTCGCACGACGCGGACGGCCATGACCATGCCAAGGAGGCCGAGGGCCACGATCATGGCGAGGAAGCCGGCCATGAGGACCACGAGCACGGCGAATTCGACATGCATCTCTGGCTGAGCCCGGACAATGCCCGCGCCATCGCCGCCGAAGCCGCCAAGGTCCTTGCCGAGAAGGACCCGGCCAATGCCGAGACCTACAACAAGAACCTCGCCGGCCTGAACGGCAGGCTCGATGCGCTCGACAAGGAGATCGCCGAGACGGTCGCCCCGGTGAAGGACAAGCCCTTCATCGTCTTCCACGACGCCTATCAGTATTTCGAGCACCATTATGGCGTCCTGACCGCCGGCTCCATCACCGTCAGCCCGGAAACCCTGCCCGGCGCCGAGCGCCTGACGCAGATCCGCGACAAGGTGAAGACGCTCGGCGCGACCTGCGTCTTCGCCGAACCGCAGTTCGAGCCGAAGCTGGTCAACGTGGTGATCGAGGGCACGCCGGCGAAATCCGGCACCCTCGACCCCGAGGCCGCCACGCTCGACCCCGGCCCGGACCTCTACTTCACCCTGATGAAGGGCATCGCCACATCGCTGCGCGATTGCCTTGGACAGGGCGGCTGA
PROTEIN sequence
Length: 345
MQKAVRTLLLSTALLAAGTLAARAEAPDVVVSIKPIHSLVAAIMQGVGEPGLIVEGAASPHTYSLKPSNAAALQDADVVFWVGHGLEAFLEKPLETLGSKATVVELEDAPGLEKLPFREGGPFEAHMHEGEDGHDHAHEGHSHDADGHDHAKEAEGHDHGEEAGHEDHEHGEFDMHLWLSPDNARAIAAEAAKVLAEKDPANAETYNKNLAGLNGRLDALDKEIAETVAPVKDKPFIVFHDAYQYFEHHYGVLTAGSITVSPETLPGAERLTQIRDKVKTLGATCVFAEPQFEPKLVNVVIEGTPAKSGTLDPEAATLDPGPDLYFTLMKGIATSLRDCLGQGG*