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SCNpilot_expt_1000_bf_scaffold_4811_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5377..6228)

Top 3 Functional Annotations

Value Algorithm Source
Glucose-binding protein n=1 Tax=Pseudomonas putida RepID=Q9Z422_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 199.0
  • Bit_score: 112
  • Evalue 8.50e-22
Glucose-binding protein {ECO:0000313|EMBL:AAD00241.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 199.0
  • Bit_score: 112
  • Evalue 1.20e-21

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGGTGGCCGTCGTCCGGCCGGCAATCTTCGGTGATCGAGCCGTCGGCATGCAGCACGCGGCCGTCCGGCAGATGCGTGTGGTCGTGGTGGTGGTTGTAGAAGGCGAGCGTCTGGCCCGCCCGCGCGCCGAAGAGGCGCTGATATTCCGGGCTCTGGCTCACCGTTTCCGGCGTGCCGCGGCAACAGACATGGCCGTTGAGACAGATGACGGTATCCGTCTCGGCCATCACGACATGCAGGTCGTGCGAGATGAGCAGGATGCCGCAGCCGGTCGTGTTGCGGATCGTCTTGATGAGGTCGTAGAGCGCGATCTCGCCGGAAAAGTCGACGCCCTGCACCGGCTCGTCGAGCACCAGCAGGTCCGGCTTGCGGGCAATGGCGCGGGCGAGCAGCGCGCGCTGGAACTCGCCGCCGGAAAGGTGCTGCACCTCCGCGCGGGCGAGATGCCGGATACCCGTCGCCTCCAGCGCCGCGTCGATCTCCGCGCCCTTGAGCGGCGAGGTCAGCGTCATCAGCCGGTCGACGGTAAGCGGCATGGTCCAGTCGACGGCGAGCTTCTGCGGCACATAGCCGACCTTGAGCCCGGCCTTGCGCTCCACCCTGCCCTCGTCCGCCTTCAGAACGCCGATTGCCGTCTTGGCGGTGGTCGACTTGCCGGAGCCGTTGGGGCCGATCAGGGTGACGATCTCGCCGGGCGAAATCGAGAATTCCACGCCGCGCACGAGCCAGCGGCCCTGGCGGCGCACGCCGACACCCGTAAGCGAGACGAGCGGCTGGAGGGTCCTGGTGGAGGTTTGCAGCATCATTTTTTCCGAAAAGCCTGTTGCCACCCGATATGGCACACGTTATAG
PROTEIN sequence
Length: 284
MVAVVRPAIFGDRAVGMQHAAVRQMRVVVVVVVEGERLARPRAEEALIFRALAHRFRRAAATDMAVETDDGIRLGHHDMQVVRDEQDAAAGRVADRLDEVVERDLAGKVDALHRLVEHQQVRLAGNGAGEQRALELAAGKVLHLRAGEMPDTRRLQRRVDLRALERRGQRHQPVDGKRHGPVDGELLRHIADLEPGLALHPALVRLQNADCRLGGGRLAGAVGADQGDDLAGRNREFHAAHEPAALAAHADTRKRDERLEGPGGGLQHHFFRKACCHPIWHTL*