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SCNpilot_expt_1000_bf_scaffold_4811_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6437..7051

Top 3 Functional Annotations

Value Algorithm Source
High-affinity zinc uptake system membrane protein ZnuB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYS9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 284
  • Evalue 6.90e-74
High-affinity zinc uptake system membrane protein ZnuB {ECO:0000313|EMBL:EYR82287.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 284
  • Evalue 9.70e-74
ABC-3 protein; K09816 zinc transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 164.0
  • Bit_score: 268
  • Evalue 1.60e-69

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGCATATTTCGGCGATACGATGGCCCATTCGGCGCTGCTCGGCGTCGCGCTGTCGCTGCTGATGAATGTCAATCTGCTGCTCAGCGTCTTCGTCGTTGCGGCGACTGTTTCCGTTCTGCTGCTGCTGCTCCAGAAGCGCGGCACGCTTTCCACCGATGCGCTGCTCGGCATTCTCTCGCATGCGACGCTCGCCATCGGCCTCGTCATGGTCTCCTTCATGACCTGGGTGCGCATCGACCTCGTCGGCTTCCTGTTCGGCGATATCCTCGCCGTCTCGCGCGCCGATGTGGACCTCGTCTGGGGCGGCGGCATCCTCGTCACCTTCGCCATCATCTGGATGTGGCGGCCGCTGATCGCCTCGACGGTCAACCCGGAACTGGCGGAGGCCGAGGGCATGCAGCCGGAGAAGACCCGGCTCGTCTTCATGCTGCTGATGGCGCTCGTCATCGCCATCGCCATGAAGATCGTCGGCATCCTGCTGATCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGTTTTCCACCAGCCCCGAGATCATGGCCGTGCTCGCCTCCGTCGTCGGGGCGCTGGCGGTGGTCGGCGGGCTGTTCGGTTCATTGA
PROTEIN sequence
Length: 205
MAYFGDTMAHSALLGVALSLLMNVNLLLSVFVVAATVSVLLLLLQKRGTLSTDALLGILSHATLAIGLVMVSFMTWVRIDLVGFLFGDILAVSRADVDLVWGGGILVTFAIIWMWRPLIASTVNPELAEAEGMQPEKTRLVFMLLMALVIAIAMKIVGILLIXXXXXXXXXXXXXGGFPPAPRSWPCSPPSSGRWRWSAGCSVH*