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SCNpilot_expt_1000_bf_scaffold_3591_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6567..8651

Top 3 Functional Annotations

Value Algorithm Source
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 693.0
  • Bit_score: 1270
  • Evalue 0.0
glycogen debranching protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FA6A3 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 695.0
  • Bit_score: 1162
  • Evalue 0.0
  • rbh
glycogen debranching enzyme GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 695.0
  • Bit_score: 1150
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2085
ATGGGGTACTCGTTTTCCGAACTCGACTTCATGAAGCCGGAGCTCGGCGCCGAATTCACCGGCGAGGGCACGCATTTCGCCGTCTTTTCCGCCCATGCCGAGCAGGTGGAGCTTTCTCTCTTCAGCGATGACGGCAAGGAGGAGACGGCGCGGCTTCCGCTGCCCAAGCGCGAGGGCGACGTCTGGTCCGGCTATATTGCCGGCCTGAAGCCCGGAACGGTTTACGGCTACCGCGCGCACGGCCCCTATGAGCCGGATGCCGGCCACCGCTTCAATCCCAACAAGCTGCTGCTCGACCCCTATGCCAAGCAGGTCCTCGGCACGCTCGACTGGAACGATGCGCTTTACGGCTACCGCATCGGGGACCCGCAGGAAGACCTGTCCTTCGACGAGCGCGACAGTGCCCCCTTCATGGTCAAGGGCGTGGTCCAGGACCCGGCCTTCGACTGGGCGGGCGACCAGGCGATCCGCCGTCCCTGGACGGAGACGATCATCTACGAGGCGCATGTGCGCGGCATGACGATGGCCCATCCGGGCGTGCCGGAAGAACTGCGCGGCACCTTCCTCGGCATGGCGAGCGACCCGATCGTCGAGCATCTCGTCGATCTCGGCATTTCCGCCGTCGAGCTGCTGCCGATCCAGTATTTCCCTGACGATCGCTATCTGCTGGAAAAGGGCCTGCGCAACTACTGGGGCTACCAGACGCTCGGCTTCTTCGCGCCGCAGCCGCGCTTCCTGTCGGGTTCGGCCATCACCGAGTTCAAGACCATGGTCAAGCGCTTCCATGCCGCGGGCATCGAGGTGATCATGGACGTGGTCTACAACCACACCGCCGAAGGCTCCGAGCGTGGGCCGACGCTCAGTTTCCGCGGGCTCGACAATCTCAGCTACTATCGCCTGTCGCCCGATGATCTCCGCCACACCTACGATACGACCGGCACGGGCAACACGCTCAACGTCGCCCATCCCATGGTGCTCCGCATGGTGCTCGACAGCCTGCGCTACTGGGTCGGCGCCATGCATGTCGACGGCTTCCGCTTCGACCTTGCCAGCACGCTCGGCCGTACCCGGCATATCGAGTTCGACCGCGAGGGCACGTTCTTCGATGCGATCCGGCAGGATCCGATGCTTTCCGGCGTCAAGCTGATCGCCGAACCGTGGGACGTCGGAGACGGCGGTTACCAGGTCGGCGGCTTCCCCCATCCGTTCCGCGAGTGGAACGACAAGTATCGCGACGACGTGCGCCGCTTCTGGAAGGGGGACGGCGGGCTCGTCCCGGGACTTGCATCCCGGCTGACGGGCTCCGCGCAGCAATTCAACCATTCCGACCGGGGCGCCACCGCATCGGTGAACCTCATCAGCGCCCATGACGGTTTCACCCTCATGGACACGGTCTCCTACGGCGACAAGCACAACGAGGCCAATGGCGAGGAGAACCGCGACGGCCACTCCGACAACCATTCGGACAATATGGGCGCCGAAGGTCCCACCGACGACGGCGGCATCCTCTCGGCGCGCTCCCGCCGCCGGCGCAACATGATCGCCACGCTGATGCTGAGCCAGGGCGTGCCGATGCTGCTGGGTGGCGACGAGCTCGGCAACGGCCAGCAGGGCAACAACAACGCCTATTGCCAGGACAACGAGATCGGCTGGACCGACTGGAGCGGCCTCGATGACCCGTTCCTCGATTTCTGCAAGGGCGCGATCGCCTTCCGCAAGGCCCACGCGGCGCTCCGGCAGGAGCGGTTCGCGACCGGCGAGCCGGCGGAGGACGGCACGGTCGAGATCGCCTGGTACAGGCCCGACGGTGCGACCATGGAGGACGCGGACTGGGAGGGCGGCGAGCTTCGGATCCTCGGCCTCTTCCTCTCGCGGCCCGCCAATGGCGAGGGGCTCGACCGGCTCTTCCTCGTCTACAATGCGGGTGGGGACTGCGCGGTGGAGCTCCCCGCGGTGAATGGCATCACGGCATGGAAACGGGTGCTGGATACGGGGGCCGAGGAGGGAGCCTTCACGGAACATCCCGCCGAAAGCCCGGCGACGGTCTACGGCGCCAGCGTCGCCGTCTTCGAACCGGCGGAATAG
PROTEIN sequence
Length: 695
MGYSFSELDFMKPELGAEFTGEGTHFAVFSAHAEQVELSLFSDDGKEETARLPLPKREGDVWSGYIAGLKPGTVYGYRAHGPYEPDAGHRFNPNKLLLDPYAKQVLGTLDWNDALYGYRIGDPQEDLSFDERDSAPFMVKGVVQDPAFDWAGDQAIRRPWTETIIYEAHVRGMTMAHPGVPEELRGTFLGMASDPIVEHLVDLGISAVELLPIQYFPDDRYLLEKGLRNYWGYQTLGFFAPQPRFLSGSAITEFKTMVKRFHAAGIEVIMDVVYNHTAEGSERGPTLSFRGLDNLSYYRLSPDDLRHTYDTTGTGNTLNVAHPMVLRMVLDSLRYWVGAMHVDGFRFDLASTLGRTRHIEFDREGTFFDAIRQDPMLSGVKLIAEPWDVGDGGYQVGGFPHPFREWNDKYRDDVRRFWKGDGGLVPGLASRLTGSAQQFNHSDRGATASVNLISAHDGFTLMDTVSYGDKHNEANGEENRDGHSDNHSDNMGAEGPTDDGGILSARSRRRRNMIATLMLSQGVPMLLGGDELGNGQQGNNNAYCQDNEIGWTDWSGLDDPFLDFCKGAIAFRKAHAALRQERFATGEPAEDGTVEIAWYRPDGATMEDADWEGGELRILGLFLSRPANGEGLDRLFLVYNAGGDCAVELPAVNGITAWKRVLDTGAEEGAFTEHPAESPATVYGASVAVFEPAE*