ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3591_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8660..9715

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA topoisomerase I protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWV5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 349.0
  • Bit_score: 591
  • Evalue 7.70e-166
  • rbh
Putative DNA topoisomerase I protein {ECO:0000313|EMBL:EYR77988.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 349.0
  • Bit_score: 591
  • Evalue 1.10e-165
putative DNA topoisomerase I protein; K03168 DNA topoisomerase I [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 346.0
  • Bit_score: 456
  • Evalue 5.50e-126
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGCGCCGGAGAACCTCAAGGAGACCGGTCTCGTCTACGTCTCCGACAGCGAGCCCGGAATCCGGCGCCAGCGCGCCGGCCGCAGCTTCTGTTATCGCCTGCCGGACGGTTCGCTGGTGCGGGATGCGGCCCTGAAGGCGCGCATCGCCTCCCTCGGCCTGCCGCCCGCCTACGAGAATGTCTGGATATGCCTTGCGGACAACGGCCATCTCCAGGCGACGGGCTACGATGCGCGCGGGCGCAAGCAGTATCGCTACCATCCCGACTGGCAGTCGCTGAAGAGCGGCGACAAGTTTGACCAGCTCATCGCCTTTGGCCGGGCGCTGCCAAAGCTCCGGCGCGCCGTGCGACGCGATCTCGACGGTGCGCCCGGCGTGATCGACACCATGCTGGCGGCGATCACCGTGCTGCTCGACGAGGCGCATCTTCGCGTCGGCAACCGCGCCTATGCCGAGGAGAACAAGACCTATGGCGCGACGACGCTCCTCAAGCGGCATGTCTCGCTCGCCGACGGGGGCATCGAGCTGCGCTTTACCGCCAAGGGCGGCAAGCGCGTGCGCAAGACGCTGAAAAACCCCCGGCTCCAGCGCCTGCTGGAGGACTGCGCCGACCTGCCGGGCCGCCAGCTTTTCGTCTGGAGGGATGACGGCGATGCGGCCCGGCCGGTCGATTCCGGCCGGCTCAACACCTATCTCGCCGATATTTCCGGCATCGCCGTTTCCGCCAAGACGTTCCGCACCTGGGCCGGCAGCCTCGCTGCCTTCTCCCTCGCGCGCCGCGTGGTAGAGGAGGGCGGCCGGCCGACGATCAAGGGCATGGCGCAGGCGGCGGCCGAGATCCTGCACAACACGCCGGCCATCGCCCGCTCGAGCTATATCCACCCGGATGTCATCGCGCTCGCCGAGGCGCCCGAGGCGTTGCGTCTTGCGCTGCGTCGCCCGCCGCTGGCCGTTGCCGGGCTCAGGGCGGAGGAGGAACGGCTGCTGCGCTTCCTGGAGAGCCGGCGGAACGCCCGCCGGCGCGCGCGCCGGAAAGCTCCGGCTTCCTCGTCGTGA
PROTEIN sequence
Length: 352
MAPENLKETGLVYVSDSEPGIRRQRAGRSFCYRLPDGSLVRDAALKARIASLGLPPAYENVWICLADNGHLQATGYDARGRKQYRYHPDWQSLKSGDKFDQLIAFGRALPKLRRAVRRDLDGAPGVIDTMLAAITVLLDEAHLRVGNRAYAEENKTYGATTLLKRHVSLADGGIELRFTAKGGKRVRKTLKNPRLQRLLEDCADLPGRQLFVWRDDGDAARPVDSGRLNTYLADISGIAVSAKTFRTWAGSLAAFSLARRVVEEGGRPTIKGMAQAAAEILHNTPAIARSSYIHPDVIALAEAPEALRLALRRPPLAVAGLRAEEERLLRFLESRRNARRRARRKAPASSS*