ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3591_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(9721..9984)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZN6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 87.0
  • Bit_score: 152
  • Evalue 1.80e-34
Uncharacterized protein {ECO:0000313|EMBL:EYR84665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 87.0
  • Bit_score: 152
  • Evalue 2.50e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 85.0
  • Bit_score: 109
  • Evalue 5.40e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGACCATCTTTGCGACAGACCGGCTGTGGGACGAGGCCGTGGTGCTCGAAGGCGACCGCCAGGTGCTTCGCGTGCAGAGCACGCGCGATGCCCTGCTCTGCCTCAAGAACCACTGGCCGATCGAGAACGGCGCCGCCGCGCGAACGGCGCAGGGCGTGTGCGAGCGGGGATTGACGAGCGACGACGATCCCGCCCTTGCCCGCCGGGCCTTCGTCGAAGCCGCCAGGGAAGCCGGTTTTCGCGTGAATTCCTGGACGACGTAG
PROTEIN sequence
Length: 88
MTIFATDRLWDEAVVLEGDRQVLRVQSTRDALLCLKNHWPIENGAAARTAQGVCERGLTSDDDPALARRAFVEAAREAGFRVNSWTT*