ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4631_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6997..7374

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAJ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 124.0
  • Bit_score: 221
  • Evalue 4.40e-55
Response regulator receiver protein {ECO:0000313|EMBL:EYR80801.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 124.0
  • Bit_score: 221
  • Evalue 6.20e-55
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 123.0
  • Bit_score: 111
  • Evalue 2.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGAAGATCACCTCGATCCTGGTCGTCGACGACGACGAGAACGACCAGTTCATCTGCGAATACACGATCCGCAAGTTCGATCCGTCGATCCGCGTCGTCAAGGCGTTCGACGGCACCGAAGCGCTCGACGCGCTGCGTGCCGGCACGCCCGATGCCATCATCCTCGACATCAACATGCCCGTGATGAACGGCTTCGAGTTCCTCGACCGCTATGCGCAGGAATTCGAGGTGCACGCCCCCGTCGTCGCCATGCTCACCAGCTCCCATCTCGGCAAGGACCGCGAGCGGGCCATGCGGTACAGCTTCGTGAAGAGCTATTTCGAAAAGCCCCTCCAGGCCGACCACCTGCGTGTCATGACCGATCTGCTGGAGGCATGA
PROTEIN sequence
Length: 126
MKITSILVVDDDENDQFICEYTIRKFDPSIRVVKAFDGTEALDALRAGTPDAIILDINMPVMNGFEFLDRYAQEFEVHAPVVAMLTSSHLGKDRERAMRYSFVKSYFEKPLQADHLRVMTDLLEA*