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SCNpilot_expt_1000_bf_scaffold_4631_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7772..9013

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESE8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 412.0
  • Bit_score: 748
  • Evalue 4.50e-213
  • rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EYR80802.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 412.0
  • Bit_score: 748
  • Evalue 6.20e-213
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 406.0
  • Bit_score: 665
  • Evalue 9.10e-189
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTCCAAGATCCGTCCCCTGATTCCCCTTCTCGTGACCGCCGGCATCCTGATCGGGGGCAACGGGCTGCAGGGCACGTTCATCGCGCTGCGTGCCTCGCAGGAGGGGTTCTCCACCTCGGTCATCGGCATCGTCGGGGCGGGCTACAGCATCGGCTTTGCCATCGGCTGCATCTATGTCACCCGCGTGCTGCGCGCCATCGGCCATATCCGCACCTTCTCGGCCATGGCCGCCATCGCCTCGGCCTCGGCCATCGCCATGGTGCTCGTCATCGACCCGGTCTTCTGGTTCCTGATGCGCCTCGTCGCCGGCATCTGCTTCGCCAGCCTCTTCGCGACCGTGGAAAGTTGGCTGAACGCCGCCGTCACCAATGCCAACCGGGCCCGCACGCTCTCCGTCTACCGCCTCGTCGACCTCGGCTCCGTCACGGCGGCGCAATATGTCATTCCGGGCATCGGCATCGGCGGCTTCGAGCTCTTCGCCATCGTCGCCATGGCGCTGTCGCTGTCCCTCGTGCCGATCTCGCTCGCCGACCGCTCCAGCCCGACCGTGCCGGAGGCGATCCGCTTCGACGTGAAGAAGCTCTGGAACATCTCTCCGCTCGCCACCGTCGGCTGCATCGTCGTCGGCCTCACCAATGCCGCCTTCCGCAACCTCGGGCCGATCTACGCCCACGACATCGGCCTGTCGGTGACCGCCATCGCCAGCTTCATGAGCGCCGGCATCGTCGGCGGCGTGGTGCTGCAATATCCGCTCGGCATCTATTCCGACCGGCTCGACCGGCGCCTCGTCATCCTTGTCGCCACGCTCGGCTCGGCGCTCGCCGCGCTGTACCTCGCCTTTTTCGCCGGCGGCGACGAATGGAAGAACCTCGTCGGCATCTTCGTCTTCGGCGCCGTCGCCATGCCGCTCTATTCGCTGTGTTCCGCCCATGCCAACGACCATGCCGGCGAGGGCGAGCATGCGCTGGTCTCGGCCGGCATGCTGTTCTTCTGGTCCTGCGGGGCGATCATCGGCCCGCTTTTCGCCTCCATCCTCCTGCAGGTCTTCGGCCCGCAGGCGCTCTTCCTCTACACCGCCGTCGTCCTCGTCGCCTTCATGGGCTACACGGCGCTGCGAATCAGCGCGCGTCCGGCCGTGCCCGCCGGCGAAAGGCGCAGCCGCTTCCGCAACCTCCTGCGCACCTCCTTCTTCTTCAACAAGCTTGCCGCTTCCGAAAAGGACCGCAACGGCCGGCGCTGA
PROTEIN sequence
Length: 414
MSKIRPLIPLLVTAGILIGGNGLQGTFIALRASQEGFSTSVIGIVGAGYSIGFAIGCIYVTRVLRAIGHIRTFSAMAAIASASAIAMVLVIDPVFWFLMRLVAGICFASLFATVESWLNAAVTNANRARTLSVYRLVDLGSVTAAQYVIPGIGIGGFELFAIVAMALSLSLVPISLADRSSPTVPEAIRFDVKKLWNISPLATVGCIVVGLTNAAFRNLGPIYAHDIGLSVTAIASFMSAGIVGGVVLQYPLGIYSDRLDRRLVILVATLGSALAALYLAFFAGGDEWKNLVGIFVFGAVAMPLYSLCSAHANDHAGEGEHALVSAGMLFFWSCGAIIGPLFASILLQVFGPQALFLYTAVVLVAFMGYTALRISARPAVPAGERRSRFRNLLRTSFFFNKLAASEKDRNGRR*