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scnpilot_solids1_trim150_scaffold_102_curated

Search features with annotation key words

Displaying items 61-90 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_102_curated_61
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

76754..78439
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036DBD6A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
scnpilot_solids1_trim150_scaffold_102_curated_62
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78589..79890
DNA (1302bp) protein (434aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIN3_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL87074.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_102_curated_63
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79950..80666)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMJ1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62556.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids1_trim150_scaffold_102_curated_64
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80955..81374)
DNA (420bp) protein (140aa)
Barstar (Barnase inhibitor) n=1 Tax=Rhodanobacter denitrificans RepID=M4NCW1_9GAMM
Barstar (barnase inhibitor)
Barstar (Barnase inhibitor) {ECO:0000313|EMBL:AGG88540.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_102_curated_65
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81371..81799)
DNA (429bp) protein (143aa)
ribonuclease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DB3795
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:EIL88394.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ribonuclease
scnpilot_solids1_trim150_scaffold_102_curated_66
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82065..82421)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93087.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_102_curated_67
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82557..83807)
DNA (1251bp) protein (417aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPZ3_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:EIL89284.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
diguanylate cyclase
scnpilot_solids1_trim150_scaffold_102_curated_68
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84089..84424)
DNA (336bp) protein (112aa)
PsiF repeat-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E2_9GAMM
PsiF repeat-containing protein {ECO:0000313|EMBL:EIL94683.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
psiF repeat protein
scnpilot_solids1_trim150_scaffold_102_curated_69
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84562..85080)
DNA (519bp) protein (173aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE6_9GAMM
methylated-DNA--protein-cysteine methyltransferase
scnpilot_solids1_trim150_scaffold_102_curated_70
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85150..86151
DNA (1002bp) protein (334aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FF2588
scnpilot_solids1_trim150_scaffold_102_curated_71
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86205..87701)
DNA (1497bp) protein (499aa)
Amidohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INJ3_KORVE
Putative hydrolase {ECO:0000313|EMBL:GAO38741.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
amidohydrolase
scnpilot_solids1_trim150_scaffold_102_curated_72
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87874..89814)
DNA (1941bp) protein (647aa)
Putative hydrolase, CocE/NonD family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN5_9GAMM
Putative hydrolase, CocE/NonD family protein {ECO:0000313|EMBL:EIM00727.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase, CocE/NonD family; K06978
scnpilot_solids1_trim150_scaffold_102_curated_73
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90029..90532
DNA (504bp) protein (168aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFP5_SPHWW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ71111.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids1_trim150_scaffold_102_curated_74
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90558..91493
DNA (936bp) protein (312aa)
Putative alpha/beta hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3M5_9GAMM
Putative alpha/beta hydrolase {ECO:0000313|EMBL:EIL94066.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_102_curated_75
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91604..93178
DNA (1575bp) protein (525aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N1_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL96172.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids1_trim150_scaffold_102_curated_76
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93240..93716)
DNA (477bp) protein (159aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Rheinheimera sp. A13L RepID=F7NW32_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
scnpilot_solids1_trim150_scaffold_102_curated_77
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93832..95196)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92429.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_102_curated_78
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

95536..98769
DNA (3234bp) protein (1078aa)
Acriflavin resistance protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I4_9BACT
AcrB/AcrD/AcrF family multidrug efflux protein
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
scnpilot_solids1_trim150_scaffold_102_curated_79
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

98766..99887
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I3_9BACT
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACO32196.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_solids1_trim150_scaffold_102_curated_80
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100405..101820
DNA (1416bp) protein (472aa)
sodium:proton antiporter n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000364DCD5
Sodium:proton antiporter {ECO:0000313|EMBL:EYT54837.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
dicarboxylate/amino acid:cation symporter
scnpilot_solids1_trim150_scaffold_102_curated_81
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101983..102348)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B405A3
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_102_curated_82
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102345..102869)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9Q6_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA17008.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids1_trim150_scaffold_102_curated_83
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103139..103942)
DNA (804bp) protein (268aa)
UPI0003CF7945 related cluster n=1 Tax=unknown RepID=UPI0003CF7945
Agmatinase {ECO:0000313|EMBL:ESY85554.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
agmatinase
scnpilot_solids1_trim150_scaffold_102_curated_84
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104041..104454)
DNA (414bp) protein (138aa)
DoxX n=1 Tax=Burkholderia sp. YI23 RepID=G8MJR9_9BURK
Membrane protein {ECO:0000313|EMBL:KDR41728.1}; Putative membrane protein {ECO:0000313|EMBL:CDY78120.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
doxX; DoxX protein; K15977 putative oxidoreductase
scnpilot_solids1_trim150_scaffold_102_curated_85
unknown

Not on your lists

comp(104675..104785)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_102_curated_86
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104782..105429)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_102_curated_87
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105747..109226
DNA (3480bp) protein (1160aa)
Putative transmembrane two component sensor histidine kinase / response regulator fusion protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ6_9GAMM
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:AGG87200.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_102_curated_88
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109257..109946)
DNA (690bp) protein (230aa)
LuxR family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI00030745A0
LuxR family transcriptional regulator {ECO:0000313|EMBL:AIF46351.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids1_trim150_scaffold_102_curated_89
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110037..111977)
DNA (1941bp) protein (647aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNF6_9GAMM
scnpilot_solids1_trim150_scaffold_102_curated_90
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112279..114744
DNA (2466bp) protein (822aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL9_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL92310.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins; K02014 iron complex outermembrane recepter protein
Displaying items 61-90 of 104 in total

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