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scnpilot_solids1_trim150_scaffold_102_curated_79

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 98766..99887

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 368.0
  • Bit_score: 236
  • Evalue 3.90e-59
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 380.0
  • Bit_score: 193
  • Evalue 1.60e-46
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACO32196.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 380.0
  • Bit_score: 193
  • Evalue 7.00e-46

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Taxonomy

Acidobacterium capsulatum → Acidobacterium → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAGTACCACGTCCAAATATTCGCGCCGCGCGGTACGCGGCTTCAGTATCGTCGTCGTGCTCGTCGCGGCGCTTGCGCTGGCCGCGCTCTGGCTCAGCCACAACCGCCACATCGTTCAGGCCGCCGAGGCCCTGCAGCTGCGGGCGGATGCTGGCCCGGCGGTCCAGGTGGCCGTGGTCCAGGCCGGTGTGCCGACGCATGAGATCAGCCTGCTTGGCGAGGCCCAGCCCTACCAGAGCGCGACCCTGTATGCGCAGGTCAGCGGTTACCTGAAAACGGTCAAGGTCGACCGCGGCGACCACGTGCGCAAGGGCCAGATCCTGGCCGAGATCGCCTCGCCGCAGATCGATTCGCAGTATCGCGGCGCCATGGCCACCCTGGCCACGGCGAAGACCACGCTACGACGCATCAGCGGCCTGGTGGGCCAGCATTACGTCTCGCAGCAGCAGGTGGACGACGCGCGTGCCGCGGTGGATACGGCACAGGCCGCGGCCGACGACCTGCACAGCCAGACTGTCTACGAGACCATACGCGCGCCGTTCGACGGTACCATCACCGCGCGCTTCGCCGATCCCGGCGCGCTGGTACAGAACGCCTCGAACAGCCAGACCTCGGCCCTGCCGATCGTCACCGTGACCGACACGCACCGCCTGCGGGTACGCGTATATGTCGACCAGCAGGATGCCGGTCAGGTCAAGCCCGGCGACGCGGCAACCATACTCGGTGCCACCAGCGCCAAGCCGCTGGCCCACGCCGTCGTCAGCCGCACTGCCGGCCAGCTCGACCCGCAGACCCGCACCATGCTGGCCGAGATTGACGTCGACAACGCCAACGACGCCATCGTGCCCGGCAGCTCGGTCAATGCAACCCTGCAACTGGCGGCCGTGCCGCATCCCACCGTGCCGGCCGCGGCGCTGGTCCTGCACGGGCAGCAGACCCTCGTCGCCTTGCTGGGCGACGACAACCGGGTGCACCTGACCCCGGTGACCCTGGCCGCAACCGATGGCGTGCATGCGCAGATTGCCGATGGGGTGCGGCCCGGGCAACGGCTCGTGCTGAACGCGGCGACGCTGGCCGACGGCAGCCTGGTGCGTCCGGAGCAGGCCGGCACGACGCCCTGA
PROTEIN sequence
Length: 374
MSTTSKYSRRAVRGFSIVVVLVAALALAALWLSHNRHIVQAAEALQLRADAGPAVQVAVVQAGVPTHEISLLGEAQPYQSATLYAQVSGYLKTVKVDRGDHVRKGQILAEIASPQIDSQYRGAMATLATAKTTLRRISGLVGQHYVSQQQVDDARAAVDTAQAAADDLHSQTVYETIRAPFDGTITARFADPGALVQNASNSQTSALPIVTVTDTHRLRVRVYVDQQDAGQVKPGDAATILGATSAKPLAHAVVSRTAGQLDPQTRTMLAEIDVDNANDAIVPGSSVNATLQLAAVPHPTVPAAALVLHGQQTLVALLGDDNRVHLTPVTLAATDGVHAQIADGVRPGQRLVLNAATLADGSLVRPEQAGTTP*