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scnpilot_solids1_trim150_scaffold_1256_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1256_curated_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..678)
DNA (678bp) protein (226aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase id=2700694 bin=GWF2_Bacteroidetes_42_66 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_1256_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(959..1744)
DNA (786bp) protein (262aa)
amidohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00036FCFE2
Amidohydrolase {ECO:0000313|EMBL:AHF14516.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase 2
scnpilot_solids1_trim150_scaffold_1256_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1906..3417)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17197.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1256_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3499..4437)
DNA (939bp) protein (313aa)
Amidohydrolase 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB6_9SPHI
Amidohydrolase {ECO:0000313|EMBL:AHF14515.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase; K07045
scnpilot_solids1_trim150_scaffold_1256_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4631..5647)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374F9D4
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT92521.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_1256_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5777..6712)
DNA (936bp) protein (312aa)
Amidohydrolase 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB6_9SPHI
Amidohydrolase {ECO:0000313|EMBL:AHF14515.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase; K07045
scnpilot_solids1_trim150_scaffold_1256_curated_7
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(6886..7896)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV6_9PLAN
Kelch motif protein
Tax=RBG_16_Aminicenantes_63_16_curated
scnpilot_solids1_trim150_scaffold_1256_curated_8
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8088..9587)
DNA (1500bp) protein (500aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0M2_CYCMS
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL23938.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_1256_curated_9
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9613..12990)
DNA (3378bp) protein (1126aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1T3_CYCMS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL23939.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_1256_curated_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13110..14297)
DNA (1188bp) protein (396aa)
FecR protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ69_PEDHD
FecR protein
FecR protein {ECO:0000313|EMBL:ACU02551.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_1256_curated_11
unknown

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14312..14530
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1256_curated_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14792..15349)
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ68_PEDHD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACU02550.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_1256_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15776..17533)
DNA (1758bp) protein (586aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W727_DYAFD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT92636.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_1256_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17544..20981)
DNA (3438bp) protein (1146aa)
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI0003805640
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT92637.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_1256_curated_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21153..22361)
DNA (1209bp) protein (403aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8Y0_9SPHI
Putative anti-sigma factor {ECO:0000313|EMBL:GAO42724.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_1256_curated_16
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22485..22697
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TM79_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR21355.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids1_trim150_scaffold_1256_curated_17
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

22675..23004
DNA (330bp) protein (110aa)
Ribonuclease VapC n=1 Tax=Beggiatoa sp. PS RepID=A7BQV8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL33221.1}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. SCADC.;"
putative virulence-associated protein; K07062
scnpilot_solids1_trim150_scaffold_1256_curated_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23117..23719)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000372B598
Uncharacterized protein {ECO:0000313|EMBL:KIC96220.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ECF subfamily RNA polymerase sigma-24 subunit
Displaying 18 items

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