ggKbase home page

scnpilot_solids2_trim150_scaffold_2105_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2105_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1..666
DNA (666bp) protein (222aa)
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F192_CONWI
DNA ligase D
DNA ligase D, 3'-phosphoesterase domain protein {ECO:0000313|EMBL:ADB52055.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2105_curated_2
unknown

Not on your lists

756..1082
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2105_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1134..1808
DNA (675bp) protein (225aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2F6_CONWI
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADB52222.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2105_curated_4

Not on your lists

comp(2056..2568)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4K0_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL16860.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2105_curated_5
unknown

Not on your lists

2864..3166
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2105_curated_6
unknown

Not on your lists

3163..3558
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2105_curated_7
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3761..4312
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7V9_9PSEU
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KFG71572.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
Carboxymuconolactone decarboxylase
scnpilot_solids2_trim150_scaffold_2105_curated_8
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4309..5187)
DNA (879bp) protein (293aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTM2_STRVO
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_2105_curated_9
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5277..5807
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KQR8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST34363.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2105_curated_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5877..6746)
DNA (870bp) protein (290aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CEL21152.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CEL21152.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
exodeoxyribonuclease III n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026290C4
Exodeoxyribonuclease III Xth
scnpilot_solids2_trim150_scaffold_2105_curated_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(6839..8239)
DNA (1401bp) protein (467aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLP1_9CHLR
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFH86691.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
scnpilot_solids2_trim150_scaffold_2105_curated_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8307..9818
DNA (1512bp) protein (504aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZH7_SOLUE
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABJ84938.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_solids2_trim150_scaffold_2105_curated_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9988..11199
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E772_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10447.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
Displaying 13 items

View Taxonomy