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scnpilot_solids2_trim150_scaffold_92_curated

Search features with annotation key words

Displaying items 31-60 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_92_curated_31
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36196..38619
DNA (2424bp) protein (808aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC84_FLUTR
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEA44330.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_92_curated_32
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(38695..39684)
DNA (990bp) protein (330aa)
Oxidoreductase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSY9_CHIPD
oxidoreductase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_92_curated_33
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39844..40377
DNA (534bp) protein (178aa)
Thioredoxin-related protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R216_OWEHD
thioredoxin-like protein
Thioredoxin-related protein {ECO:0000313|EMBL:AEV33966.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_92_curated_34
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40381..41208
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQW3_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR21663.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_92_curated_35
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41211..42149)
DNA (939bp) protein (313aa)
Ribonuclease BN id=4647525 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
ribonuclease BN; K07058 membrane protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_92_curated_36
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

42204..45377
DNA (3174bp) protein (1058aa)
UvrD/REP helicase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FM41_FLAJ1
UvrD/REP helicase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_37
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

45379..48159
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S8Q2_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_38
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


48265..48795
DNA (531bp) protein (177aa)
30S ribosomal protein S16 n=1 Tax=Alistipes sp. AP11 RepID=UPI000375C829
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
30S ribosomal protein S16
scnpilot_solids2_trim150_scaffold_92_curated_39
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48808..49350
DNA (543bp) protein (181aa)
Ribosome maturation factor RimM n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0Y4_9PORP
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM
scnpilot_solids2_trim150_scaffold_92_curated_40
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49340..50017
DNA (678bp) protein (226aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH34_FLUTR
scnpilot_solids2_trim150_scaffold_92_curated_41
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

50077..51180
DNA (1104bp) protein (368aa)
Mrp n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C469_9BACT
Mrp {ECO:0000313|EMBL:ERM84614.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
chromosome partitioning ATPase
scnpilot_solids2_trim150_scaffold_92_curated_42
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51206..52741)
DNA (1536bp) protein (512aa)
Putative uncharacterized protein id=4122636 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_92_curated_43
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52835..54505
DNA (1671bp) protein (557aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Uncharacterized protein {ECO:0000313|EMBL:CEG57673.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
acyl-CoA dehydrogenase id=4964099 bin=GWA2__Bacteriovorax-rel_49_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
scnpilot_solids2_trim150_scaffold_92_curated_44
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54507..55598)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1B5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03387.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
transmembrane transport protein
scnpilot_solids2_trim150_scaffold_92_curated_45
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55775..57130)
DNA (1356bp) protein (452aa)
RND family efflux transporter, MFP subunit id=4649034 bin=GWF2_Bacteroidetes_49_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
RND family efflux transporter, MFP subunit
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids2_trim150_scaffold_92_curated_46
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57142..58530)
DNA (1389bp) protein (463aa)
Outer membrane protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1V3_OWEHD
outer membrane protein; K12340 outer membrane channel protein
Outer membrane protein {ECO:0000313|EMBL:AEV32879.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_92_curated_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58627..58905)
DNA (279bp) protein (93aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI51_CHIPD
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_92_curated_48
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58907..59311)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000372EE58
Uncharacterized protein {ECO:0000313|EMBL:KFD39152.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59312..60040)
DNA (729bp) protein (243aa)
ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035E46CA
scnpilot_solids2_trim150_scaffold_92_curated_50
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60086..61687
DNA (1602bp) protein (534aa)
putative modification methyltransferase (EC:2.1.1.72)
Probable modification methyltransferase {ECO:0000313|EMBL:CCB70156.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCB70156.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Probable modification methyltransferase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z2I4_FLABF
scnpilot_solids2_trim150_scaffold_92_curated_51
Capnocytophaga ochracea, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61684..62451
DNA (768bp) protein (256aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:ACU92147.1}; EC=3.1.21.4 {ECO:0000313|EMBL:ACU92147.1};; Flags: Precursor;; TaxID=521097 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 /; NCTC 12371 / VPI 2845) (Bacteroides ochraceus).;"
Type II site-specific deoxyribonuclease n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M7J0_CAPOD
scnpilot_solids2_trim150_scaffold_92_curated_52
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62458..64584)
DNA (2127bp) protein (709aa)
Penicilin amidase n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I6W9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KGE85235.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
peptidase S45 penicillin amidase
scnpilot_solids2_trim150_scaffold_92_curated_53
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64710..66374
DNA (1665bp) protein (555aa)
DNA repair protein RecN n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSP9_SOLCM
DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_92_curated_54
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66377..67471
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
NGG1p interacting factor 3 protein, NIF3 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B688C7
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_55
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

67477..68232
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ58_CHIPD
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:ACU64296.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_92_curated_56
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68434..70326
DNA (1893bp) protein (631aa)
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_92_curated_57
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70338..71063)
DNA (726bp) protein (242aa)
DNA repair protein RecO n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYV2_HALH1
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
DNA repair protein recO; K03584 DNA repair protein RecO (recombination protein O)
scnpilot_solids2_trim150_scaffold_92_curated_58
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71063..72964)
DNA (1902bp) protein (634aa)
Penicillin-binding protein 2 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXS8_SOLCM
penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:AFD05493.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_92_curated_59
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(73152..78329)
DNA (5178bp) protein (1726aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF34231.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Putative uncharacterized protein id=4989426 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_60
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78531..79535
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R221_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:GAL70892.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
hypothetical protein
Displaying items 31-60 of 97 in total

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