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scnpilot_solids2_trim150_scaffold_92_curated

Search features with annotation key words

Displaying items 61-90 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_92_curated_61
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(79543..80433)
DNA (891bp) protein (297aa)
Sterol desaturase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AJ84_FLELS
sterol desaturase
Sterol desaturase {ECO:0000313|EMBL:AFM04019.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_solids2_trim150_scaffold_92_curated_62
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(80488..81762)
DNA (1275bp) protein (425aa)
Tyrosine--tRNA ligase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K314_9BACT
tyrosyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_63
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(81791..83416)
DNA (1626bp) protein (542aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Balneola vulgaris RepID=UPI0003781BE7
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AKD02375.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_92_curated_64
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83567..84043)
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=3681222 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_92_curated_65
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

84256..85338
DNA (1083bp) protein (361aa)
O-methyltransferase n=1 Tax=Cytophaga aurantiaca RepID=UPI00035F7630
type 12 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_66
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

comp(85360..86352)
DNA (993bp) protein (331aa)
wcaG; nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD dependent epimerase/dehydratase n=2 Tax=Acetivibrio cellulolyticus RepID=UPI0002481AC0
Tax=GWF2_Melainabacteria_32_7_curated
scnpilot_solids2_trim150_scaffold_92_curated_67
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(86349..87620)
DNA (1272bp) protein (424aa)
Tax=RBG_16_Planctomycetes_41_13_curated
scnpilot_solids2_trim150_scaffold_92_curated_68
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87572..88474)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZYZ7_9BACT
FkbM family methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_92_curated_69
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

88612..90126
DNA (1515bp) protein (505aa)
ADP-heptose synthase id=4585818 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytidyltransferase
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
scnpilot_solids2_trim150_scaffold_92_curated_70
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

90132..90746
DNA (615bp) protein (205aa)
sugar isomerase (SIS); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
sugar isomerase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B471A3
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_92_curated_71
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

90746..91531
DNA (786bp) protein (262aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol-phosphate phosphatase {ECO:0000313|EMBL:ACK42179.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ACK42179.1};; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
Inositol-phosphate phosphatase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E151_DICTD
scnpilot_solids2_trim150_scaffold_92_curated_72
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

91528..92427
DNA (900bp) protein (300aa)
Putative uncharacterized protein id=3807303 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_92_curated_73
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

92575..92925
DNA (351bp) protein (117aa)
Transcriptional regulator, ArsR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL99_CHIPD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU58443.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_92_curated_74
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

93020..93337
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036FBF07
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGE87755.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
regulatory protein ArsR; K03892 ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_92_curated_75
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93499..94284)
DNA (786bp) protein (262aa)
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease RNase T and DNA polymerase III n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SPM6_BACT6
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ADV43867.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
scnpilot_solids2_trim150_scaffold_92_curated_76
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94403..96145
DNA (1743bp) protein (581aa)
Sodium:solute symporter family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JRT1_9BACT
Sodium:solute symporter family protein {ECO:0000313|EMBL:ELR71570.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Na+/proline symporter
scnpilot_solids2_trim150_scaffold_92_curated_77
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(96285..99419)
DNA (3135bp) protein (1045aa)
RND transporter, HAE1 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VMD5_9SPHI
RND transporter, HAE1 family {ECO:0000313|EMBL:EFK58140.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids2_trim150_scaffold_92_curated_78
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99454..100497)
DNA (1044bp) protein (348aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C797_SPHS2
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADZ80172.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_92_curated_79
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100606..101934)
DNA (1329bp) protein (443aa)
Outer membrane efflux protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4E3_9SPHI
Outer membrane efflux protein {ECO:0000313|EMBL:EEI89944.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
outer membrane efflux protein
scnpilot_solids2_trim150_scaffold_92_curated_80
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(101950..102528)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAR8_PEDSD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADY53689.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_92_curated_81
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

102752..103864
DNA (1113bp) protein (371aa)
Histone protein id=4395369 bin=GWF2_Bacteroidetes_35_48 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_82
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

104001..105401
DNA (1401bp) protein (467aa)
Fumarate hydratase class II (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Fumarate hydratase class II n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDE5_FLUTR
scnpilot_solids2_trim150_scaffold_92_curated_83
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(105440..106915)
DNA (1476bp) protein (492aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Z3_9SPHI
Biotin carboxylase {ECO:0000313|EMBL:AKD04837.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_92_curated_84
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(107109..109550)
DNA (2442bp) protein (814aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
aspartokinase n=1 Tax=Cytophaga aurantiaca RepID=UPI00037B620C
Aspartate kinase {ECO:0000313|EMBL:KIF34296.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_solids2_trim150_scaffold_92_curated_85

Not on your lists

comp(109650..111494)
DNA (1845bp) protein (615aa)
Chemotaxis protein methyltransferase CheR n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D8W0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN41659.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PAS domain-containing protein
scnpilot_solids2_trim150_scaffold_92_curated_86
unknown

Not on your lists

comp(111644..112150)
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_92_curated_87
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(112651..113493)
DNA (843bp) protein (281aa)
Copper homeostasis protein CutF n=1 Tax=Cecembia lonarensis LW9 RepID=K1L6B3_9BACT
Lipoprotein {ECO:0000313|EMBL:BAQ60760.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_88
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113562..114182)
DNA (621bp) protein (207aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC42_9SPHI
Phosphoglycerate mutase {ECO:0000313|EMBL:EHQ29605.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_92_curated_89
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114194..115087)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=4507310 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_92_curated_90
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(115107..115898)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036DED1F
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
Displaying items 61-90 of 97 in total

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