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scnpilot_solids2_trim150_scaffold_92_curated

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_92_curated_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL02_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAM08947.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_92_curated_2
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

294..1694
DNA (1401bp) protein (467aa)
Fibronectin type III domain protein id=4161777 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_92_curated_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

1772..3217
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YZ4_CYTH3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

3372..4553
DNA (1182bp) protein (394aa)
Glycosyltransferase id=4125633 bin=GWF2_Bacteroidetes_41_31 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

4550..5716
DNA (1167bp) protein (389aa)
Glycosyl transferase group 1 id=4214834 bin=GWF2_Bacteroidetes_35_48 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
glycosyl transferase group 1
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_92_curated_6
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5728..6978
DNA (1251bp) protein (417aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FT15_9SPHI
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_solids2_trim150_scaffold_92_curated_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6985..7581
DNA (597bp) protein (199aa)
Probable GTP-binding protein EngB n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZMY0_9BACT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
scnpilot_solids2_trim150_scaffold_92_curated_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7612..9654
DNA (2043bp) protein (681aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9Y1_PEDSD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY52539.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_92_curated_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

9908..11290
DNA (1383bp) protein (461aa)
tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase id=1926409 bin=GWB2_Ignavibacteria_35_12 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_solids2_trim150_scaffold_92_curated_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11341..11742
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000348B587
Uncharacterized protein {ECO:0000313|EMBL:KIF31480.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_11
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11739..12197
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037E3BCC
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
SsrA-binding protein; K03664 SsrA-binding protein
scnpilot_solids2_trim150_scaffold_92_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12209..16957)
DNA (4749bp) protein (1583aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB1_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV99351.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_92_curated_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17074..17523)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG4_NIAKG
hypothetical protein; K09117 hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_92_curated_14
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17534..18655)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C4FA6
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_92_curated_15
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18856..19869
DNA (1014bp) protein (338aa)
Uncharacterized protein with a von Willebrand factor type A (VWA) domain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAS3_NIAKG
von Willebrand factor A {ECO:0000313|EMBL:KIF34325.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19875..20897)
DNA (1023bp) protein (341aa)
radical SAM protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371C189
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACT91476.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_92_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(20922..22178)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000378E3D2
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_92_curated_18
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22165..24018)
DNA (1854bp) protein (618aa)
asnB; asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase id=4957975 bin=GWA2_Bacteroidetes_40_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_92_curated_19
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24151..24603
DNA (453bp) protein (151aa)
Protein containing peptidyl-tRNA hydrolase domain n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M5V5_GRAFK
peptidyl-tRNA hydrolase domain-containing protein; K15034 ribosome-associated protein
Protein containing peptidyl-tRNA hydrolase domain {ECO:0000313|EMBL:CAL68000.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
scnpilot_solids2_trim150_scaffold_92_curated_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

24856..26259
DNA (1404bp) protein (468aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R220_OWEHD
FAD/FMN-dependent dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_92_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26311..27543
DNA (1233bp) protein (411aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB76_CHIPD
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KIC93809.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_92_curated_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27545..28546)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNZ5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58692.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_92_curated_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28623..29921)
DNA (1299bp) protein (433aa)
Uncharacterized protein {ECO:0000313|EMBL:KHJ38505.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
PKD domain containing protein id=3606236 bin=GWF2_Bacteroidetes_43_63 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_24
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30016..30348)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003818EC2
Uncharacterized protein {ECO:0000313|EMBL:AKD05353.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein; K09922 hypothetical protein
scnpilot_solids2_trim150_scaffold_92_curated_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30427..32046)
DNA (1620bp) protein (540aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Ribonuclease Y n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU48_CHIPD
phosphodiesterase; K06950 uncharacterized protein
scnpilot_solids2_trim150_scaffold_92_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32224..32523)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS9_NIAKG
hypothetical protein; K09888 cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_92_curated_27
unknown

Not on your lists

comp(32513..32818)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_92_curated_28
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32833..35073)
DNA (2241bp) protein (747aa)
Putative uncharacterized protein id=4535078 bin=GWF2_Bacteroidetes_35_48 species=unidentified eubacterium SCB49 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_92_curated_29
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35170..35577)
DNA (408bp) protein (136aa)
Methylmalonyl-CoA mutase domain protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
methylmalonyl-CoA mutase n=1 Tax=Pedobacter agri RepID=UPI00029B46F1
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ETZ19397.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_92_curated_30
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35581..35898)
DNA (318bp) protein (106aa)
rne; ribonuclease E Rne; K08300 ribonuclease E [EC:3.1.26.12]
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FHT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14884.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
Displaying items 1-30 of 97 in total

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