ggKbase home page

scnpilot_solids2_trim150_scaffold_139_curated

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_139_curated_1
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..557
DNA (555bp) protein (185aa)
Putative uncharacterized protein id=3804437 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
fibronectin type III domain protein
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_139_curated_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(625..1623)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003738BE2
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_139_curated_3
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1613..3175)
DNA (1563bp) protein (521aa)
Sulfatase n=1 Tax=Flavobacterium sp. F52 RepID=J1ABF9_9FLAO
Sulfatase {ECO:0000313|EMBL:EJF99368.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
sulfatase
scnpilot_solids2_trim150_scaffold_139_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3235..4965)
DNA (1731bp) protein (577aa)
Peptidase M23 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2B0_PEDHD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACU03103.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_139_curated_5
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4990..5676)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7N794_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ94278.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_139_curated_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5639..7141)
DNA (1503bp) protein (501aa)
Na+/solute symporter n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GND7_9BACT
Na+/solute symporter
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_139_curated_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(7246..8796)
DNA (1551bp) protein (517aa)
Sulfate transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV5_NIAKG
sulfate transporter
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_139_curated_8
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8880..10706)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A29FF
Tax=RBG_13_Bacteroidetes_46_8_curated
scnpilot_solids2_trim150_scaffold_139_curated_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10800..13859
DNA (3060bp) protein (1020aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRR8_HALH1
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:AEE50022.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_139_curated_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13872..14468)
DNA (597bp) protein (199aa)
riboflavin synthase, subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ADY52381.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ADY52381.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
riboflavin synthase subunit alpha n=1 Tax=Pedobacter arcticus RepID=UPI0002E9A506
scnpilot_solids2_trim150_scaffold_139_curated_11
unknown

Not on your lists

14630..14800
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_139_curated_12
unknown

Not on your lists

14836..15138
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_139_curated_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15158..15751
DNA (594bp) protein (198aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBC5_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_139_curated_14
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15809..17605)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3C8_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31949.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_139_curated_15
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18013..18570
DNA (558bp) protein (186aa)
cytochrome c oxidase, subunit II (EC:1.9.3.1)
Putative cytochrome c oxidase, subunit II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ9_9BACT
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_139_curated_16
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18579..20024
DNA (1446bp) protein (482aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Putative cytochrome c oxidase, subunit I n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ8_9BACT
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_139_curated_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19991..20740
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ4_9BACT
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_139_curated_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20741..21775)
DNA (1035bp) protein (345aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Pseudouridine synthase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMV4_SOLCM
pseudouridine synthase family protein
scnpilot_solids2_trim150_scaffold_139_curated_19
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21845..22822)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00037EB227
Uncharacterized protein {ECO:0000313|EMBL:BAQ61822.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
scnpilot_solids2_trim150_scaffold_139_curated_20
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22952..23320)
DNA (369bp) protein (123aa)
dgkA; diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
Undecaprenol kinase n=1 Tax=Bacillus isronensis B3W22 RepID=K1L3Y4_9BACI
Strain B4065 NODE_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIO67496.1}; Strain B4166 NODE_329, whole genome shotgun sequence {ECO:0000313|EMBL:KIO61198.1}; Strain B4167 NODE_397, whole genome shotgun sequence {ECO:0000313|EMBL:KIO70291.1}; Uncharacterized protein {ECO:0000313|EMBL:CEE02066.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
scnpilot_solids2_trim150_scaffold_139_curated_21
unknown

Not on your lists

23413..23730
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_139_curated_22
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23735..24664)
DNA (930bp) protein (310aa)
Probable carbohydrate kinase, PfkB family protein id=2835590 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
PfkB domain-containing protein
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_solids2_trim150_scaffold_139_curated_23
unknown

Not on your lists

24894..25121
DNA (228bp) protein (76aa)
hypothetical protein; K07461 putative endonuclease
scnpilot_solids2_trim150_scaffold_139_curated_24
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25327..26229)
DNA (903bp) protein (301aa)
PKD domain protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1E1_OWEHD
PKD domain-containing protein
PKD domain protein {ECO:0000313|EMBL:AEV33884.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_139_curated_25
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26277..27356
DNA (1080bp) protein (360aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XCV2_9BACT
scnpilot_solids2_trim150_scaffold_139_curated_26
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27362..28057)
DNA (696bp) protein (232aa)
ComF family protein id=2597455 bin=GWC2_Bacteroidetes_33_15 species=Bacteroides oleiciplenus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
phosphoribosyltransferase
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_139_curated_27
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28143..30035
DNA (1893bp) protein (631aa)
acetate/CoA ligase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetate/CoA ligase {ECO:0000313|EMBL:AEI49076.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AEI49076.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
acetyl-CoA synthetase n=1 Tax=Pedobacter arcticus RepID=UPI000310F763
scnpilot_solids2_trim150_scaffold_139_curated_28
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30036..30533)
DNA (498bp) protein (166aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Phosphodiesterase, MJ0936 family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EKN9_RUNSL
phosphodiesterase; K07095
scnpilot_solids2_trim150_scaffold_139_curated_29
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30602..31459)
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:AEA42716.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AEA42716.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II16_FLUTR
scnpilot_solids2_trim150_scaffold_139_curated_30
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31468..31872)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT53_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KJS05891.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
Displaying items 1-30 of 89 in total

View Taxonomy