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scnpilot_solids2_trim150_scaffold_139_curated

Search features with annotation key words

Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_139_curated_31
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(31937..32818)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP27_SOLCM
site-specific recombinase XerD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_139_curated_32
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33091..33456
DNA (366bp) protein (122aa)
nuoA; NADH dehydrogenase I subunit A (EC:1.6.99.5); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00036C5581
scnpilot_solids2_trim150_scaffold_139_curated_33
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33531..34070
DNA (540bp) protein (180aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nuoB; NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=NUOB_FLAPJ
scnpilot_solids2_trim150_scaffold_139_curated_34
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34084..34614
DNA (531bp) protein (177aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
NADH dehydrogenase (ubiquinone), 30 kDa subunit; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000376FB0F
scnpilot_solids2_trim150_scaffold_139_curated_35
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34683..35924
DNA (1242bp) protein (414aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
nuoD; NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit D n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z5Y2_FLABF
scnpilot_solids2_trim150_scaffold_139_curated_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36164..37090
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFN8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63450.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_139_curated_37
unknown

Not on your lists

37116..37328
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_139_curated_38
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37365..38600)
DNA (1236bp) protein (412aa)
Phosphohydrolase, MutT family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WV2_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:AII51312.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
MutT family phosphohydrolase; K07098
scnpilot_solids2_trim150_scaffold_139_curated_39
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

38697..40400
DNA (1704bp) protein (568aa)
peptidase M1 n=1 Tax=Psychroflexus tropicus RepID=UPI000361AE9B
aminopeptidase N
Tax=GWA2_Ignavibacteria_54_16_curated
scnpilot_solids2_trim150_scaffold_139_curated_40
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40415..41020)
DNA (606bp) protein (202aa)
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:EMR03753.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EMR03753.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
glutamine amidotransferase; K01658 anthranilate synthase component II [EC:4.1.3.27]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368AD0A
scnpilot_solids2_trim150_scaffold_139_curated_41
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41398..42219
DNA (822bp) protein (274aa)
flagellar motor protein MotA n=1 Tax=Spirosoma luteum RepID=UPI00037932C1
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCH56894.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
scnpilot_solids2_trim150_scaffold_139_curated_42
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42247..42876
DNA (630bp) protein (210aa)
Biopolymertransporter ExbD/TolR n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI96_9BACT id=720856 bin=RAAC39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKD02511.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
outer membrane transport energization protein ExbD
scnpilot_solids2_trim150_scaffold_139_curated_43
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42904..43491
DNA (588bp) protein (196aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN2_CHIPD
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACU58925.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_139_curated_44
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43544..44356
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036BB874
Transport protein TonB {ECO:0000313|EMBL:KHJ37112.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
TonB family protein; K03832 periplasmic protein TonB
scnpilot_solids2_trim150_scaffold_139_curated_45
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

44443..45063
DNA (621bp) protein (207aa)
Glycosyl transferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWC8_MELRP
glycosyl transferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_solids2_trim150_scaffold_139_curated_46
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45156..46229
DNA (1074bp) protein (358aa)
Collagen triple helix repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9B3_FLUTR
Collagen triple helix repeat-containing protein
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AEA44070.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_139_curated_47
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(46226..47458)
DNA (1233bp) protein (411aa)
HD superfamily phosphohydrolase n=1 Tax=Polaribacter sp. MED152 RepID=A2U223_9FLAO
HD superfamily phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_139_curated_48
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47500..47874)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP; K15067 2-aminomuconate deaminase [EC:3.5.99.5]
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD8_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_139_curated_49
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47930..48694)
DNA (765bp) protein (255aa)
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase id=4132523 bin=GWF2_Bacteroidetes_49_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids2_trim150_scaffold_139_curated_50
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(48704..49057)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJT8_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_139_curated_51
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49133..49714)
DNA (582bp) protein (194aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Flavobacterium sp. F52 RepID=J1KR72_9FLAO
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KIC63838.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
scnpilot_solids2_trim150_scaffold_139_curated_52
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49727..50341)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDJ4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43367.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_139_curated_53
RBG_13_Bacteroidetes_44_24_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50412..51128)
DNA (717bp) protein (239aa)
3''''-5'''' exonuclease n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CC81
hypothetical protein; K07501 hypothetical protein
Tax=RBG_13_Bacteroidetes_44_24_curated
scnpilot_solids2_trim150_scaffold_139_curated_54
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51222..52142
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CBDEE
Uncharacterized protein {ECO:0000313|EMBL:KGE85371.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_139_curated_55
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52275..56294
DNA (4020bp) protein (1340aa)
Putative type IIS restriction/modification enzyme n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7D0_PEDSD
type IIS restriction/modification enzyme
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_139_curated_56
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(56369..57676)
DNA (1308bp) protein (436aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A2R0_ORNRL
MiaB-like tRNA modifying enzyme
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_139_curated_57
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57732..59117)
DNA (1386bp) protein (462aa)
Trigger factor n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1W5_OWEHD
trigger factor; K03545 trigger factor
Trigger factor {ECO:0000313|EMBL:AEV33915.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_139_curated_58
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59308..59649)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RCK5_CELLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH15253.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
scnpilot_solids2_trim150_scaffold_139_curated_59
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59736..60665)
DNA (930bp) protein (310aa)
DNA uptake protein and related DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP71_NIAKG
DNA uptake protein and related DNA-binding protein
DNA uptake protein and related DNA-binding protein {ECO:0000313|EMBL:AEW03189.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_139_curated_60
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(60821..61693)
DNA (873bp) protein (291aa)
Uncharacterized protein id=1963899 bin=GWE2_Bacteroidetes_42_42 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWF2_Bacteroidetes_43_63_curated
Displaying items 31-60 of 89 in total

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