ggKbase home page

scnpilot_solids2_trim150_scaffold_139_curated_31

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(31937..32818)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP27_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 292.0
  • Bit_score: 311
  • Evalue 9.90e-82
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 292.0
  • Bit_score: 311
  • Evalue 3.10e-82
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 292.0
  • Bit_score: 315
  • Evalue 7.40e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
GTGAACCATCTTTTGTCTTTTATTGCTTTTATTGAATTTGAAAAACGCTATTCACCCAATACCATTTTGGCATATCGAAACGATATTGAGCAATTTACCGTTTTTTTAGACCAGTTTAAAACTCCACTCGAAGCCGTTTCGCACTTTCATATTCGCAATTGGATGGTTTCTTTAATGAAAGATGGCGACACCGCGCGCAGCGTAAACCGAAAAGTTTCTTCACTAAAATCTTTCTATAAATTTTTACTGCGCAAAGGTGTAATTCAAAACAACCCAACCGCAAAAGTAATTACGCCAAAAGTAGGCAAAAAATTACCTGTATTTGTTGAAGAAAACAGCATGGAAAAATTGCTGAATAAAGTTGAGTTTGCAGATGATATTTTCGGCAAGCGCGACAAACTGATAATAGAACTGCTTTACGCTACCGGCATGAGGCGCAGTGAACTTAGAAACATAAAAGATGCCGATTTAGATTCGTGGAACAGCCAAATAAAAGTGCTTGGCAAAGGCAGCAAAGAACGGCTAATTCCGCTTCACCCAAGCATGGTTCAAAAAATTCAAAAATTTATTGAAGAAAGAAAAATAGAACTGCCGGAATACCAATTTCCTTTCCTCTTTTTCGGTAAAAAATTACAGCCAATTAAAGACCACGAAATTTATACTGTGGTGAAACAAAACTTATCTGCCGTTACCACTTTGGAAAAGAAAAGCCCACACGTTTTGCGACATTCTTTTGCCACACATTTGCTAAACGAAGGCGCAGAAATAAATGCTATTAAAGAAATTTTAGGACACGCCAACCTCGCAGCCACACAAGTTTACACGCACAACACGATTGAAAAACTAAAAAGTGTTCACAAGCAAGCGCACCCACGAGCATAA
PROTEIN sequence
Length: 294
VNHLLSFIAFIEFEKRYSPNTILAYRNDIEQFTVFLDQFKTPLEAVSHFHIRNWMVSLMKDGDTARSVNRKVSSLKSFYKFLLRKGVIQNNPTAKVITPKVGKKLPVFVEENSMEKLLNKVEFADDIFGKRDKLIIELLYATGMRRSELRNIKDADLDSWNSQIKVLGKGSKERLIPLHPSMVQKIQKFIEERKIELPEYQFPFLFFGKKLQPIKDHEIYTVVKQNLSAVTTLEKKSPHVLRHSFATHLLNEGAEINAIKEILGHANLAATQVYTHNTIEKLKSVHKQAHPRA*