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scnpilot_solids2_trim150_scaffold_116_curated

Search features with annotation key words

Displaying items 61-90 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_116_curated_61
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63757..65622)
DNA (1866bp) protein (622aa)
DNA mismatch repair protein MutL n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0L9_9SPHI
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL
scnpilot_solids2_trim150_scaffold_116_curated_62
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65907..66560
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase id=4626700 bin=GWC2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_solids2_trim150_scaffold_116_curated_63
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

66659..67795
DNA (1137bp) protein (379aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQQ4_EMTOG
Alcohol dehydrogenase {ECO:0000313|EMBL:KIA91932.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
iron-containing alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_116_curated_64
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

67858..68538
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CPJ8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA84531.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_116_curated_65
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68568..70208)
DNA (1641bp) protein (547aa)
Endonuclease I n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VQA5_9FLAO
Endonuclease I {ECO:0000313|EMBL:EPR72161.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_116_curated_66
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(70332..71090)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036F422A
Beta-propeller domains of methanol dehydrogenase {ECO:0000313|EMBL:EMS32912.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
hypothetical protein; K06872 uncharacterized protein
scnpilot_solids2_trim150_scaffold_116_curated_67
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(71145..71588)
DNA (444bp) protein (148aa)
hypothetical protein AtheD1_12833 id=2933589 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_116_curated_68
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(71598..72176)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037CADF0
LemA family protein {ECO:0000313|EMBL:AKD02697.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_116_curated_69
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72352..72684
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QIU6_CATAD
hypothetical protein; K09153 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU76996.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
scnpilot_solids2_trim150_scaffold_116_curated_70
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

72692..74020
DNA (1329bp) protein (443aa)
Collagen triple helix repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9B3_FLUTR
Collagen triple helix repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_116_curated_71
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74017..75240)
DNA (1224bp) protein (408aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000313|EMBL:ACU58757.1}; EC=1.4.1.1 {ECO:0000313|EMBL:ACU58757.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Alanine dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ68_CHIPD
scnpilot_solids2_trim150_scaffold_116_curated_72
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75572..77107
DNA (1536bp) protein (512aa)
Acyl-CoA dehydrogenase, long-chain specific {ECO:0000313|EMBL:EAY30688.1}; EC=1.3.8.8 {ECO:0000313|EMBL:EAY30688.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
citronellyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase, long-chain specific n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFB4_9BACT
scnpilot_solids2_trim150_scaffold_116_curated_73
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77262..77681)
DNA (420bp) protein (140aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
nucleoside diphosphate kinase n=1 Tax=Riemerella columbina RepID=UPI00035C12DA
scnpilot_solids2_trim150_scaffold_116_curated_74
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

77849..78658
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=4087111 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_116_curated_75
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78662..79288)
DNA (627bp) protein (209aa)
Putative NADH-flavin reductase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRR0_SOLCM
putative NADH-flavin reductase
Putative NADH-flavin reductase {ECO:0000313|EMBL:AFD07641.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_116_curated_76
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(79304..79708)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQC7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28836.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
osmC; putative stress-induced protein OsmC
scnpilot_solids2_trim150_scaffold_116_curated_77
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(79823..81496)
DNA (1674bp) protein (558aa)
Fibronectin type III domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZI8_HALH1
Uncharacterized protein {ECO:0000313|EMBL:AHJ99385.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
fibronectin type III
scnpilot_solids2_trim150_scaffold_116_curated_78
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

81586..82023
DNA (438bp) protein (146aa)
Clan AA aspartic protease id=3142806 bin=GWF2_Bacteroidetes_29_10 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_116_curated_79
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(82015..82728)
DNA (714bp) protein (238aa)
Pyridoxine 5'-phosphate synthase id=2160975 bin=GWA2_Bacteroidetes_42_15 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
pyridoxine 5''-phosphate synthase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_116_curated_80
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

82834..83409
DNA (576bp) protein (192aa)
Regulatory protein TetR n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PXS1_9CYAN
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AFY37898.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
scnpilot_solids2_trim150_scaffold_116_curated_81
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(83434..83949)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349F941
hexapeptide repeat-containing transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_116_curated_82
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(83963..85732)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B752D6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_116_curated_83
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85729..86736)
DNA (1008bp) protein (336aa)
nucleotidyl transferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D2A9B
Nucleotidyl transferase {ECO:0000313|EMBL:AHM62582.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids2_trim150_scaffold_116_curated_84
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(86797..87477)
DNA (681bp) protein (227aa)
Uncharacterized protein id=4474428 bin=GWF2_Bacteroidetes_42_66 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_116_curated_85
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(87548..88957)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KGE2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03195.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_116_curated_86
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89141..89716)
DNA (576bp) protein (192aa)
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19); K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
Histidine biosynthesis bifunctional protein HisB n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY78_FLAPJ
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
scnpilot_solids2_trim150_scaffold_116_curated_87
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89713..90756)
DNA (1044bp) protein (348aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Histidinol-phosphate aminotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJK6_NIAKG
scnpilot_solids2_trim150_scaffold_116_curated_88
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(90857..92809)
DNA (1953bp) protein (651aa)
Probable potassium transport system protein kup n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJQ8_9BACT
Potassium transporter Kup {ECO:0000313|EMBL:KIF30768.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
kup; potassium transport system protein Kup; K03549 KUP system potassium uptake protein
scnpilot_solids2_trim150_scaffold_116_curated_89
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

93003..95501
DNA (2499bp) protein (833aa)
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDB0_CHIPD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_116_curated_90
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

95544..97616
DNA (2073bp) protein (691aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE86123.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
Tetratricopeptide TPR_2 repeat-containing protein id=3162741 bin=GWF2_Bacteroidetes_42_66 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Displaying items 61-90 of 106 in total

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