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scnpilot_solids2_trim150_scaffold_116_curated

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_116_curated_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_2
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(251..1159)
DNA (909bp) protein (303aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.42); K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HYC0_9FLAO
scnpilot_solids2_trim150_scaffold_116_curated_3
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1156..1848)
DNA (693bp) protein (231aa)
peptidase C26 n=1 Tax=Pedobacter agri RepID=UPI000299EDAD
Peptidase C26 {ECO:0000313|EMBL:KIA91931.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
peptidase C26; K07010 putative glutamine amidotransferase
scnpilot_solids2_trim150_scaffold_116_curated_4
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1922..2653
DNA (732bp) protein (244aa)
Gliding motility protein GldF n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L4F5_SAPGL
gldF; gliding motility protein GldF
Gliding motility protein GldF {ECO:0000313|EMBL:AFC22834.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_116_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2729..4456
DNA (1728bp) protein (576aa)
Gliding-associated putative ABC transporter substrate-binding component GldG n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6H6_PEDSD
Gliding motility protein GldG {ECO:0000313|EMBL:KIC95257.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
gliding-associated ABC transporter substrate-binding protein GldG
scnpilot_solids2_trim150_scaffold_116_curated_6
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4489..5265)
DNA (777bp) protein (259aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
multifunctional protein surE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE n=1 Tax=Imtechella halotolerans K1 RepID=I0WI98_9FLAO
scnpilot_solids2_trim150_scaffold_116_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5289..7079)
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
GTP-binding protein LepA n=1 Tax=Niabella aurantiaca RepID=UPI00035F0D33
GTP-binding protein lepA; K03596 GTP-binding protein LepA
scnpilot_solids2_trim150_scaffold_116_curated_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7170..8381)
DNA (1212bp) protein (404aa)
aspartate aminotransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5F69F
aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AFD07145.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_116_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8519..9835)
DNA (1317bp) protein (439aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003761B13
scnpilot_solids2_trim150_scaffold_116_curated_10
unknown

Not on your lists

comp(10048..10245)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036B1DD4
scnpilot_solids2_trim150_scaffold_116_curated_11
unknown

Not on your lists

comp(10393..10656)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10978..11940)
DNA (963bp) protein (321aa)
PKD domain-containing protein n=1 Tax=Aquimarina agarilytica RepID=UPI000288DF22
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_116_curated_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12453..13715)
DNA (1263bp) protein (421aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE9_CHIPD
scnpilot_solids2_trim150_scaffold_116_curated_14
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13892..15340
DNA (1449bp) protein (483aa)
cysteine desulfurase activator complex subunit SufB n=1 Tax=Dyadobacter beijingensis RepID=UPI000379BD80
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:GAL85044.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
scnpilot_solids2_trim150_scaffold_116_curated_15
Neoceratium horridum, Neoceratium, Gonyaulacales, Dinophyceae, Eukaryota

Not on your lists

15397..16155
DNA (759bp) protein (253aa)
Putative ATP-dependent transporter Ycf16 n=1 Tax=Neoceratium horridum RepID=Q84UW3_NEOHO
Putative ATP-dependent transporter Ycf16 {ECO:0000313|EMBL:AAO85447.1}; TaxID=203191 species="Eukaryota; Alveolata; Dinophyceae; Gonyaulacales; Ceratiaceae; Neoceratium.;" source="Neoceratium horridum (Dinoflagellate) (Ceratium horridum).;"
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
scnpilot_solids2_trim150_scaffold_116_curated_16
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

16169..17452
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003714D39
sufD; iron-regulated ABC transporter membrane-spanning permease; K09015 Fe-S cluster assembly protein SufD
Tax=RBG_13_Caldithrix_44_9_curated
scnpilot_solids2_trim150_scaffold_116_curated_17
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17471..18685
DNA (1215bp) protein (405aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
Cysteine desulfurase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AHS3_FLELS
cysteine desulfurase-like protein, SufS subfamily
scnpilot_solids2_trim150_scaffold_116_curated_18
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18726..19484)
DNA (759bp) protein (253aa)
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_116_curated_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

19652..21340
DNA (1689bp) protein (563aa)
Monooxygenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTH2_HALO1
FAD-binding monooxygenase protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_116_curated_20
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21337..22068
DNA (732bp) protein (244aa)
UnbL n=1 Tax=Lechevalieria aerocolonigenes RepID=Q84HM6_NOCAE
UnbL {ECO:0000313|EMBL:AAO25861.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_116_curated_21
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22156..23331)
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AII51535.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AII51535.1};; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
acetyl-CoA acetyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B35CE1
scnpilot_solids2_trim150_scaffold_116_curated_22
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23375..23734)
DNA (360bp) protein (120aa)
S23 ribosomal protein id=4923342 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
S23 ribosomal protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_116_curated_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23771..26209)
DNA (2439bp) protein (813aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNM3_SOLCM
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFD08156.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_116_curated_24
unknown

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comp(26246..26542)
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_25
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26675..27622)
DNA (948bp) protein (316aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Methylenetetrahydrofolate reductase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K2T8_9BACT
5,10-methylenetetrahydrofolate reductase
scnpilot_solids2_trim150_scaffold_116_curated_26
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27651..29135)
DNA (1485bp) protein (495aa)
auxin-regulated protein n=1 Tax=Eudoraea adriatica RepID=UPI0003647246
Uncharacterized protein {ECO:0000313|EMBL:KJS07207.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
gh3 auxin-responsive promoter
scnpilot_solids2_trim150_scaffold_116_curated_27
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29280..30773
DNA (1494bp) protein (498aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
glycerol kinase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036A31CA
scnpilot_solids2_trim150_scaffold_116_curated_28
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30787..32232)
DNA (1446bp) protein (482aa)
Amino acid transporter n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KY52_SOLCM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AFD05790.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_116_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32417..34312
DNA (1896bp) protein (632aa)
DNA topoisomerase type IIA subunit B domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE73_NIAKG
DNA topoisomerase type IIA subunit B region 2 domain protein {ECO:0000313|EMBL:AEV97264.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_116_curated_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34463..35212
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DC3326
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44065.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 1-30 of 106 in total

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