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scnpilot_solids2_trim150_scaffold_116_curated

Search features with annotation key words

Displaying items 31-60 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_116_curated_31
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35499..37466)
DNA (1968bp) protein (656aa)
Methylcrotonoyl-CoA carboxylase alpha chain {ECO:0000313|EMBL:EAY24229.1}; EC=6.4.1.4 {ECO:0000313|EMBL:EAY24229.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
Methylcrotonoyl-CoA carboxylase alpha chain n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZI3_9BACT
acetyl/propionyl-coenzyme A carboxylase alpha subunit
scnpilot_solids2_trim150_scaffold_116_curated_32
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37495..39093)
DNA (1599bp) protein (533aa)
mccB; Methylcrotonoyl-CoA carboxylase beta chain (EC:6.4.1.4)
AccD2 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZI1_9BACT
AccD2 {ECO:0000313|EMBL:EAY24227.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
scnpilot_solids2_trim150_scaffold_116_curated_33
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39169..41391)
DNA (2223bp) protein (741aa)
PIF1 helicase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C2C4_9FLAO
PIF1 helicase {ECO:0000313|EMBL:EJL62911.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
ATPase AAA
scnpilot_solids2_trim150_scaffold_116_curated_34
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41649..41996
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000375AE24
ytxJ; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_solids2_trim150_scaffold_116_curated_35
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41941..43152
DNA (1212bp) protein (404aa)
putative lipoprotein id=3748343 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_116_curated_36
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

43145..43486
DNA (342bp) protein (114aa)
DNA-directed RNA polymerase, omega subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC9_CHIPD
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_116_curated_37
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43508..44041
DNA (534bp) protein (178aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036523DD
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KGE88992.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_116_curated_38
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


44118..44492
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=2 Tax=root RepID=R5WEP7_9BACT
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_116_curated_39
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44592..45188
DNA (597bp) protein (199aa)
GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
GTP cyclohydrolase 1 n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ARF9_MARSH
scnpilot_solids2_trim150_scaffold_116_curated_40

Not on your lists

comp(45197..45844)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRR3_MARTH
Uncharacterized protein {ECO:0000313|EMBL:KKN20766.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_116_curated_41
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


46058..46501
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW6_9SPHI
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
scnpilot_solids2_trim150_scaffold_116_curated_42
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


46583..47278
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E2_NIAKG
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids2_trim150_scaffold_116_curated_43
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


47308..47835
DNA (528bp) protein (176aa)
50S ribosomal protein L10 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUH5_HALH1
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_solids2_trim150_scaffold_116_curated_44
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(47966..48616)
DNA (651bp) protein (217aa)
Methyltransferase type 11 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KX47_HALH1
type 11 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_116_curated_45
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48616..49110)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KP65_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48859.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_116_curated_46
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49163..51784)
DNA (2622bp) protein (874aa)
Surface antigen variable number repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK6_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42847.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
surface antigen variable number repeat-containing protein; K07277 outer membrane protein
scnpilot_solids2_trim150_scaffold_116_curated_47
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51850..52644)
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9V1_PEDSD
scnpilot_solids2_trim150_scaffold_116_curated_48
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52714..53541)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THH0_NIAKG
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_116_curated_49
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

53876..54565
DNA (690bp) protein (230aa)
Silent information regulator protein Sir2 id=3911708 bin=GWF2_Bacteroidetes_29_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
NAD-dependent protein deacetylase, SIR2 family
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_116_curated_50
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54634..55632
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CEP49069.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CEP49069.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
nucleoside-diphosphate-sugar epimerase (EC:5.1.3.12); K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
NAD-dependent epimerase/dehydratase n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4BW73_CROWT
scnpilot_solids2_trim150_scaffold_116_curated_51
unknown

Not on your lists

comp(55687..55899)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_52
unknown

Not on your lists

55987..57453
DNA (1467bp) protein (489aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_53
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

57498..58319
DNA (822bp) protein (274aa)
50S ribosomal protein L11 methylase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase id=3596114 bin=GWF2_Bacteroidetes_33_16 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_116_curated_54
Cylindrospermopsis raciborskii, Cylindrospermopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

58364..59596
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00034700CA
Uncharacterized protein {ECO:0000313|EMBL:EFA69304.1}; TaxID=533240 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermopsis.;" source="Cylindrospermopsis raciborskii CS-505.;"
Tfp pilus assembly protein PilF
scnpilot_solids2_trim150_scaffold_116_curated_55
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


59608..60186
DNA (579bp) protein (193aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Fl
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XMJ0_LEEBM
scnpilot_solids2_trim150_scaffold_116_curated_56
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60414..60818)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUC5_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE51207.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_116_curated_57
unknown

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comp(60815..61645)
DNA (831bp) protein (277aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_116_curated_58
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61689..62255)
DNA (567bp) protein (189aa)
RNA polymerase sigma factor id=4488749 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_116_curated_59
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(62306..63286)
DNA (981bp) protein (327aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase central region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5D2_DYAFD
Transketolase central region {ECO:0000313|EMBL:ACT94150.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_116_curated_60
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63346..63720)
DNA (375bp) protein (125aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Niabella soli DSM 19437 RepID=H1NMH5_9SPHI
Glyoxalase {ECO:0000313|EMBL:AHF14698.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying items 31-60 of 106 in total

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