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scnpilot_solids2_trim150_scaffold_116_curated_36

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 43145..43486

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, omega subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 107.0
  • Bit_score: 119
  • Evalue 1.60e-24
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 107.0
  • Bit_score: 119
  • Evalue 5.10e-25
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 109.0
  • Bit_score: 121
  • Evalue 7.90e-25

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGATAAGAGTAAAAAAGTAAAGCTATCGCAGCTAAATCCTTACATCGAAACACAAAGTTTGGCAGCTATTGCAGGTAAAACAGGCAATTTATACGAGTCTTTGTATATTATTTCTCGTAGAGCAAACCAAATTGGAAAAGAATTAAAAGAAGAACTTCATTCTAAATTAAAAGATTTTGAATCGAACGATTCTTTAGAGGAAATAAACGAAAACCGTGAGCAAATTGAAATTTCACGTTTTTATGAGCGTTTGCCGCATGCAACACTTATTGCTACCAACGAATTTATGGATGGCAACGTTTATTACCGCGAAAATTTCGAAGGTAACGAAGCAAAATAA
PROTEIN sequence
Length: 114
MDKSKKVKLSQLNPYIETQSLAAIAGKTGNLYESLYIISRRANQIGKELKEELHSKLKDFESNDSLEEINENREQIEISRFYERLPHATLIATNEFMDGNVYYRENFEGNEAK*