ggKbase home page

scnpilot_solids2_trim150_scaffold_20_curated

Search features with annotation key words

Displaying items 31-60 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_20_curated_31
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33282..33761
DNA (480bp) protein (160aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPV8_EMTOG
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AFK01711.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_20_curated_32
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33812..34540
DNA (729bp) protein (243aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Prevotella salivae F0493 RepID=U2KLM5_9BACT
scnpilot_solids2_trim150_scaffold_20_curated_33
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34631..35137
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RFJ2_CELLC
Uncharacterized protein {ECO:0000313|EMBL:EWH13315.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_34
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35147..35338)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3X2_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05415.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_20_curated_35
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35427..36473)
DNA (1047bp) protein (349aa)
Cytochrome c assembly protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6A0_HALH1
cytochrome c assembly protein; K02195 heme exporter protein C
Cytochrome c assembly protein {ECO:0000313|EMBL:AEE54118.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_20_curated_36
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36502..37170)
DNA (669bp) protein (223aa)
ABC transporter permease n=1 Tax=Echinicola pacifica RepID=UPI00037A2B99
cytochrome c biogenesis ABC transporter permease
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:AGA77079.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids2_trim150_scaffold_20_curated_37
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(37181..38197)
DNA (1017bp) protein (339aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
tRNA-dihydrouridine synthase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L518_HALH1
nifR3 family TIM-barrel protein
scnpilot_solids2_trim150_scaffold_20_curated_38
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

38505..38777
DNA (273bp) protein (91aa)
Glycine/D-amino acid oxidase (Deaminating) n=1 Tax=delta proteobacterium BABL1 RepID=V6DH07_9DELT
FAD dependent oxidoreductase
Tax=AR17
scnpilot_solids2_trim150_scaffold_20_curated_39
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

38874..39152
DNA (279bp) protein (93aa)
Glycine/D-amino acid oxidase (Deaminating) n=1 Tax=delta proteobacterium BABL1 RepID=V6DH07_9DELT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
scnpilot_solids2_trim150_scaffold_20_curated_40
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

39233..39769
DNA (537bp) protein (179aa)
Glycine/D-amino acid oxidase (Deaminating) n=1 Tax=delta proteobacterium BABL1 RepID=V6DH07_9DELT
FAD dependent oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
scnpilot_solids2_trim150_scaffold_20_curated_41
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39764..40396)
DNA (633bp) protein (211aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED id=4190455 bin=GWF2_Bacteroidetes_33_38 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_20_curated_42
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40403..40933)
DNA (531bp) protein (177aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TKX4_MARTH
tRNA/rRNA methyltransferase (spou)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADR22277.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_20_curated_43
unknown

Not on your lists

comp(40937..41386)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_44
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(41422..42774)
DNA (1353bp) protein (451aa)
Aldehyde Dehydrogenase {ECO:0000313|EMBL:KKT74247.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
Putative aldehyde dehydrogenase id=4667058 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
NAD-dependent aldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_20_curated_45
unknown

Not on your lists

comp(42786..43304)
DNA (519bp) protein (173aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_46
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(43423..46578)
DNA (3156bp) protein (1052aa)
Putative uncharacterized protein n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SIF3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:BAL55939.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_47
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46946..48922
DNA (1977bp) protein (659aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
DNA gyrase subunit B n=2 Tax=Solitalea canadensis RepID=H8KXU6_SOLCM
DNA gyrase subunit B
scnpilot_solids2_trim150_scaffold_20_curated_48
unknown

Not on your lists

49009..49164
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_49
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(49174..49959)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKM4_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49531.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
scnpilot_solids2_trim150_scaffold_20_curated_50
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50240..51853
DNA (1614bp) protein (538aa)
Ferredoxin-dependent glutamate synthase n=2 Tax=Myroides RepID=H1ZF06_MYROD
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:EHQ44191.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
glutamate synthase family protein
scnpilot_solids2_trim150_scaffold_20_curated_51
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

51945..52598
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TT17_MARTH
channel protein, hemolysin iii family; K11068 hemolysin III
Channel protein, hemolysin III family {ECO:0000313|EMBL:ADR20865.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_20_curated_52

Not on your lists

52675..54222
DNA (1548bp) protein (516aa)
id=5084003 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Uncharacterized protein {ECO:0000313|EMBL:KKS98617.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
scnpilot_solids2_trim150_scaffold_20_curated_53
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54223..55098)
DNA (876bp) protein (292aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BR67_9FLAO
trans-enoyl or 2,4-dienoyl-CoA reductase
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_solids2_trim150_scaffold_20_curated_54
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55239..56615)
DNA (1377bp) protein (459aa)
NADH dehydrogenase {ECO:0000313|EMBL:KGO90410.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KGO90410.1};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH dehydrogenase n=1 Tax=Flavobacterium rivuli RepID=UPI0003621380
scnpilot_solids2_trim150_scaffold_20_curated_55
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(56788..57735)
DNA (948bp) protein (316aa)
OmpA/MotB domain protein id=1927356 bin=GWE2_Bacteroidetes_42_42 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
OmpA/MotB family outer hypothetical protein; K02557 chemotaxis protein MotB
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_solids2_trim150_scaffold_20_curated_56
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

57804..58559
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B7406
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKR33940.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_20_curated_57
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58645..59625
DNA (981bp) protein (327aa)
Cation diffusion facilitator family transporter n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4Y2_HALH1
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEE54044.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_20_curated_58
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

59625..60182
DNA (558bp) protein (186aa)
NUDIX hydrolase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPZ9_HALH1
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KJS07490.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
NUDIX hydrolase
scnpilot_solids2_trim150_scaffold_20_curated_59
unknown

Not on your lists

comp(60192..60647)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_60
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(60809..64372)
DNA (3564bp) protein (1188aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8F6_PEDSD
hypothetical protein
Tax=CG_Bacteroid_01
Displaying items 31-60 of 219 in total

View Taxonomy