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scnpilot_solids2_trim150_scaffold_20_curated

Search features with annotation key words

Displaying items 211-219 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_20_curated_211
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(239911..241542)
DNA (1632bp) protein (544aa)
molecular chaperone GroEL n=1 Tax=Segetibacter koreensis RepID=UPI000366B2C7
chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_20_curated_212
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(241616..241894)
DNA (279bp) protein (93aa)
10 kDa chaperonin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI90_CHIPD
chaperonin Cpn10; K04078 chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_20_curated_213
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(242042..243586)
DNA (1545bp) protein (515aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEW02026.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_20_curated_214
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

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comp(243809..243898)
DNA (90bp) protein (30aa)
TPR repeat-containing protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RG86_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:CCG00047.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_215
unknown

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comp(243929..244771)
DNA (843bp) protein (281aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_216
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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244945..245391
DNA (447bp) protein (149aa)
Putative membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CKR7_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EOC99320.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_217
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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245388..246539
DNA (1152bp) protein (384aa)
Putative aminopeptidase id=4698697 bin=GWC2_Tenericute_34_14 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
peptidase M28
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
scnpilot_solids2_trim150_scaffold_20_curated_218
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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246582..247934
DNA (1353bp) protein (451aa)
Mg-chelatase subunit ChlD id=1890379 bin=GWB2_Bacteroidetes_32_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Mg-chelatase subunit ChlD
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_20_curated_219
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(247958..248971)
DNA (1014bp) protein (338aa)
Transcription termination factor Rho n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF9_CHIPD
transcription termination factor Rho; K03628 transcription termination factor Rho
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 211-219 of 219 in total

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