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scnpilot_solids2_trim150_scaffold_20_curated

Search features with annotation key words

Displaying items 181-210 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_20_curated_181
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(205796..206698)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JI68_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68520.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
PASTA domain-containing protein
scnpilot_solids2_trim150_scaffold_20_curated_182
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

206795..207826
DNA (1032bp) protein (344aa)
UPF0176 protein C900_03330 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPY1_9BACT
UPF0176 protein C900_03330 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
rhodanese domain-containing protein; K07146 UPF0176 protein
scnpilot_solids2_trim150_scaffold_20_curated_183
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(207841..208521)
DNA (681bp) protein (227aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSZ9_AEQSU
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFL80117.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_solids2_trim150_scaffold_20_curated_184
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(208567..208998)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B729B
BadM/Rrf2 family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_20_curated_185
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(209002..209325)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037285E6
Uncharacterized protein {ECO:0000313|EMBL:AHM62707.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_186
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(209322..210614)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036764AF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_20_curated_187
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(210618..211427)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368937D
Uncharacterized protein {ECO:0000313|EMBL:KIC95129.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_188
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(211424..211756)
DNA (333bp) protein (111aa)
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_20_curated_189
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(211898..213598)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031B1AD1
Nitric oxide-dependent regulator DnrN or NorA {ECO:0000313|EMBL:ELR72005.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling
scnpilot_solids2_trim150_scaffold_20_curated_190
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

213885..216992
DNA (3108bp) protein (1036aa)
Putative uncharacterized protein id=1775419 bin=GWE2_Bacteroidetes_42_24 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_20_curated_191
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

217117..219633
DNA (2517bp) protein (839aa)
peptidase s45 penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11]
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037EEC61
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:ADR21052.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_20_curated_192
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

219637..220152
DNA (516bp) protein (172aa)
Trifunctional NAD biosynthesis/regulator protein NadR n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N611_9BACT
Trifunctional NAD biosynthesis/regulator protein NadR {ECO:0000313|EMBL:EMR02676.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
putative ATPase/kinase involved in NAD metabolism
scnpilot_solids2_trim150_scaffold_20_curated_193
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

220244..221329
DNA (1086bp) protein (362aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
thiouridylase n=1 Tax=Lewinella cohaerens RepID=UPI00037E7A55
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
scnpilot_solids2_trim150_scaffold_20_curated_194
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(221369..223468)
DNA (2100bp) protein (700aa)
Peptidase S8 and S53 subtilisin kexin sedolisin id=4366570 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_20_curated_195
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(223496..224701)
DNA (1206bp) protein (402aa)
GTPase HflX n=1 Tax=Niabella soli DSM 19437 RepID=H1NQM1_9SPHI
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP-binding proten HflX; K03665 GTP-binding protein HflX
scnpilot_solids2_trim150_scaffold_20_curated_196
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

225025..226620
DNA (1596bp) protein (532aa)
primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDJ4_9SPHI
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_20_curated_197
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

226765..227544
DNA (780bp) protein (260aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ADR23688.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ADR23688.1};; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
Short chain enoyl-CoA hydratase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQJ5_MARTH
scnpilot_solids2_trim150_scaffold_20_curated_198
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(227546..228505)
DNA (960bp) protein (320aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanyl-alanine synthetase A id=4424906 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_solids2_trim150_scaffold_20_curated_199
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(228502..229107)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00037CD0E5
Uncharacterized protein {ECO:0000313|EMBL:EJF11883.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_200
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

229257..230471
DNA (1215bp) protein (405aa)
Putative AP superfamily protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R675_OWEHD
putative AP superfamily protein
Putative AP superfamily protein {ECO:0000313|EMBL:AEV33295.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_20_curated_201
unknown

Not on your lists

230574..231524
DNA (951bp) protein (317aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_202
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

231652..233748
DNA (2097bp) protein (699aa)
Peptidase S45 penicillin amidase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUF2_EMTOG
peptidase S45 penicillin amidase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_20_curated_203
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

233756..234412
DNA (657bp) protein (219aa)
Endonuclease/Exonuclease/phosphatase family protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP08_FLAIG
Endonuclease/Exonuclease/phosphatase family protein
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:CCG52275.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_solids2_trim150_scaffold_20_curated_204
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(234468..236012)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000315B2D6
Uncharacterized protein {ECO:0000313|EMBL:KER10086.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_20_curated_205
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(235978..236490)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00030606A7
Uncharacterized protein {ECO:0000313|EMBL:KER10085.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
scnpilot_solids2_trim150_scaffold_20_curated_206
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(236520..236645)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:KER10085.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
scnpilot_solids2_trim150_scaffold_20_curated_207
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(236720..237373)
DNA (654bp) protein (218aa)
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Segetibacter koreensis RepID=UPI000379BB58
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit {ECO:0000313|EMBL:EOR31012.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta
scnpilot_solids2_trim150_scaffold_20_curated_208
unknown

Not on your lists

238049..238306
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_209
unknown

Not on your lists

238313..239407
DNA (1095bp) protein (365aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_20_curated_210
unknown

Not on your lists

239397..239831
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 181-210 of 219 in total

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